Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
RPL13AP40429 OR2A1-AS1-204ENST00000470435 602 ntBASIC13.95□□□□□ -0.18
RPL13AP40429 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC13.95□□□□□ -0.18
RPL13AP40429 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC13.95□□□□□ -0.18
RPL13AP40429 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.95□□□□□ -0.18
RPL13AP40429 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.95□□□□□ -0.18
RPL13AP40429 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 LINC01529-204ENST00000636474 1715 ntBASIC13.95□□□□□ -0.18
RPL13AP40429 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RPL13AP40429 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.95□□□□□ -0.18
RPL13AP40429 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
RPL13AP40429 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
RPL13AP40429 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.94□□□□□ -0.18
RPL13AP40429 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 AL158211.5-201ENST00000623583 2518 ntBASIC13.94□□□□□ -0.18
RPL13AP40429 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 AC239859.2-201ENST00000444165 318 ntBASIC13.94□□□□□ -0.18
RPL13AP40429 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC13.94□□□□□ -0.18
RPL13AP40429 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 AC137630.3-201ENST00000607245 391 ntBASIC13.94□□□□□ -0.18
RPL13AP40429 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC13.94□□□□□ -0.18
RPL13AP40429 AC009086.3-201ENST00000623486 1008 ntBASIC13.94□□□□□ -0.18
RPL13AP40429 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
RPL13AP40429 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL13AP40429 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RPL13AP40429 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.93□□□□□ -0.18
RPL13AP40429 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RPL13AP40429 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RPL13AP40429 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RPL13AP40429 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 LBH-205ENST00000407930 756 ntTSL 2 BASIC13.93□□□□□ -0.18
RPL13AP40429 GUSBP5-201ENST00000418136 578 ntBASIC13.93□□□□□ -0.18
RPL13AP40429 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC13.93□□□□□ -0.18
RPL13AP40429 GAK-223ENST00000628912 497 ntTSL 5 BASIC13.93□□□□□ -0.18
RPL13AP40429 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RPL13AP40429 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RPL13AP40429 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RPL13AP40429 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
RPL13AP40429 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.93□□□□□ -0.18
RPL13AP40429 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC13.93□□□□□ -0.18
RPL13AP40429 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.93□□□□□ -0.18
RPL13AP40429 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RPL13AP40429 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
RPL13AP40429 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RPL13AP40429 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RPL13AP40429 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL13AP40429 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RPL13AP40429 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RPL13AP40429 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RPL13AP40429 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
RPL13AP40429 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RPL13AP40429 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.92□□□□□ -0.18
RPL13AP40429 C17orf82-201ENST00000623772 1530 ntBASIC13.92□□□□□ -0.18
RPL13AP40429 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RPL13AP40429 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RPL13AP40429 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC13.92□□□□□ -0.18
RPL13AP40429 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC13.92□□□□□ -0.18
RPL13AP40429 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPL13AP40429 MIR4281-201ENST00000580852 62 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms