Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 HDA3YPR179C 1968 nt1.74□□□□□ -2.13
LSM5P40089 IRR1YIL026C 3453 nt1.74□□□□□ -2.13
LSM5P40089 YER135CYER135C 393 nt1.74□□□□□ -2.13
LSM5P40089 YGL239CYGL239C 315 nt1.74□□□□□ -2.13
LSM5P40089 tT(UGU)HtT(UGU)H 72 nt1.74□□□□□ -2.13
LSM5P40089 YPL182CYPL182C 384 nt1.74□□□□□ -2.13
LSM5P40089 AGC1YPR021C 2709 nt1.73□□□□□ -2.13
LSM5P40089 RPL31AYDL075W 342 nt1.73□□□□□ -2.13
LSM5P40089 ABM1YJR108W 372 nt1.73□□□□□ -2.13
LSM5P40089 NFU1YKL040C 771 nt1.73□□□□□ -2.13
LSM5P40089 YKL063CYKL063C 504 nt1.73□□□□□ -2.13
LSM5P40089 HSL1YKL101W 4557 nt1.73□□□□□ -2.13
LSM5P40089 RVS161YCR009C 798 nt1.72□□□□□ -2.13
LSM5P40089 RPS27AYKL156W 249 nt1.72□□□□□ -2.13
LSM5P40089 YPL205CYPL205C 345 nt1.72□□□□□ -2.13
LSM5P40089 YCL046WYCL046W 324 nt1.72□□□□□ -2.13
LSM5P40089 ZIP1YDR285W 2628 nt1.72□□□□□ -2.13
LSM5P40089 SWI6YLR182W 2412 nt1.72□□□□□ -2.13
LSM5P40089 ZRG17YNR039C 1818 nt1.71□□□□□ -2.14
LSM5P40089 YDR509WYDR509W 348 nt1.71□□□□□ -2.14
LSM5P40089 PAU18YLL064C 363 nt1.71□□□□□ -2.14
LSM5P40089 YLR287CYLR287C 1068 nt1.71□□□□□ -2.14
LSM5P40089 PAU6YNR076W 363 nt1.71□□□□□ -2.14
LSM5P40089 LRE1YCL051W 1752 nt1.71□□□□□ -2.14
LSM5P40089 DIE2YGR227W 1578 nt1.71□□□□□ -2.14
LSM5P40089 YHL009W-AYHL009W-A 1242 nt1.7□□□□□ -2.14
LSM5P40089 YHR028W-AYHR028W-A 321 nt1.7□□□□□ -2.14
LSM5P40089 RTP1YMR185W 2946 nt1.7□□□□□ -2.14
LSM5P40089 ERP4YOR016C 624 nt1.7□□□□□ -2.14
LSM5P40089 YOR032W-AYOR032W-A 201 nt1.7□□□□□ -2.14
LSM5P40089 SPO24YPR036W-A 204 nt1.7□□□□□ -2.14
LSM5P40089 SFB2YNL049C 2631 nt1.7□□□□□ -2.14
LSM5P40089 YLR146W-AYLR146W-A 189 nt1.69□□□□□ -2.14
LSM5P40089 YMR230W-AYMR230W-A 189 nt1.69□□□□□ -2.14
LSM5P40089 YBL071CYBL071C 309 nt1.69□□□□□ -2.14
LSM5P40089 PEP1YBL017C 4740 nt1.69□□□□□ -2.14
LSM5P40089 RUF22RUF22 515 nt1.68□□□□□ -2.14
LSM5P40089 HHT1YBR010W 411 nt1.68□□□□□ -2.14
LSM5P40089 MKT1YNL085W 2493 nt1.68□□□□□ -2.14
LSM5P40089 DNF3YMR162C 4971 nt1.67□□□□□ -2.14
LSM5P40089 MSH5YDL154W 2706 nt1.67□□□□□ -2.14
LSM5P40089 YDR008CYDR008C 351 nt1.67□□□□□ -2.14
LSM5P40089 YHR210CYHR210C 1026 nt1.67□□□□□ -2.14
LSM5P40089 SXM1YDR395W 2835 nt1.67□□□□□ -2.14
LSM5P40089 SEC5YDR166C 2916 nt1.67□□□□□ -2.14
LSM5P40089 YLR035C-AYLR035C-A 3468 nt1.66□□□□□ -2.14
LSM5P40089 MLH3YPL164C 2148 nt1.66□□□□□ -2.14
LSM5P40089 FAB1YFR019W 6837 nt1.66□□□□□ -2.14
LSM5P40089 YIL066W-AYIL066W-A 444 nt1.66□□□□□ -2.14
LSM5P40089 BRR2YER172C 6492 nt1.64□□□□□ -2.15
LSM5P40089 BST1YFL025C 3090 nt1.64□□□□□ -2.15
LSM5P40089 TIM13YGR181W 318 nt1.63□□□□□ -2.15
LSM5P40089 COA6YMR244C-A 315 nt1.63□□□□□ -2.15
LSM5P40089 YNL324WYNL324W 396 nt1.63□□□□□ -2.15
LSM5P40089 RPL32YBL092W 393 nt1.63□□□□□ -2.15
LSM5P40089 NCA2YPR155C 1851 nt1.63□□□□□ -2.15
LSM5P40089 MON2YNL297C 4911 nt1.62□□□□□ -2.15
LSM5P40089 YOR192C-CYOR192C-C 237 nt1.62□□□□□ -2.15
LSM5P40089 YOP1YPR028W 543 nt1.62□□□□□ -2.15
LSM5P40089 DGR2YKL121W 2559 nt1.62□□□□□ -2.15
LSM5P40089 GDS1YOR355W 1569 nt1.62□□□□□ -2.15
LSM5P40089 EFR3YMR212C 2349 nt1.61□□□□□ -2.15
LSM5P40089 SLY1YDR189W 2001 nt1.61□□□□□ -2.15
LSM5P40089 YDR003W-AYDR003W-A 123 nt1.61□□□□□ -2.15
LSM5P40089 ANS1YHR126C 480 nt1.61□□□□□ -2.15
LSM5P40089 EMC5YIL027C 426 nt1.61□□□□□ -2.15
LSM5P40089 YIL059CYIL059C 366 nt1.61□□□□□ -2.15
LSM5P40089 YLR406C-AYLR406C-A 150 nt1.61□□□□□ -2.15
LSM5P40089 CFT1YDR301W 4074 nt1.61□□□□□ -2.15
LSM5P40089 TBS1YBR150C 3285 nt1.6□□□□□ -2.15
LSM5P40089 YDL011CYDL011C 324 nt1.6□□□□□ -2.15
LSM5P40089 CBS1YDL069C 690 nt1.6□□□□□ -2.15
LSM5P40089 YDR114CYDR114C 303 nt1.6□□□□□ -2.15
LSM5P40089 RTT102YGR275W 474 nt1.6□□□□□ -2.15
LSM5P40089 PHS1YJL097W 654 nt1.6□□□□□ -2.15
LSM5P40089 YLR140WYLR140W 327 nt1.6□□□□□ -2.15
LSM5P40089 LYS14YDR034C 2373 nt1.6□□□□□ -2.15
LSM5P40089 SDH7YDR511W 402 nt1.59□□□□□ -2.15
LSM5P40089 VPS20YMR077C 666 nt1.59□□□□□ -2.15
LSM5P40089 KIP1YBL063W 3336 nt1.59□□□□□ -2.16
LSM5P40089 TRM3YDL112W 4311 nt1.58□□□□□ -2.16
LSM5P40089 RTR1YER139C 681 nt1.58□□□□□ -2.16
LSM5P40089 COF1YLL050C 432 nt1.58□□□□□ -2.16
LSM5P40089 YLR264C-AYLR264C-A 117 nt1.58□□□□□ -2.16
LSM5P40089 SPO23YBR250W 1572 nt1.58□□□□□ -2.16
LSM5P40089 PXA2YKL188C 2562 nt1.57□□□□□ -2.16
LSM5P40089 SAS3YBL052C 2496 nt1.57□□□□□ -2.16
LSM5P40089 YLL054CYLL054C 2532 nt1.57□□□□□ -2.16
LSM5P40089 YDR269CYDR269C 324 nt1.57□□□□□ -2.16
LSM5P40089 YJL022WYJL022W 309 nt1.57□□□□□ -2.16
LSM5P40089 YOR376WYOR376W 369 nt1.57□□□□□ -2.16
LSM5P40089 RAD50YNL250W 3939 nt1.57□□□□□ -2.16
LSM5P40089 UFD2YDL190C 2886 nt1.57□□□□□ -2.16
LSM5P40089 MVP1YMR004W 1536 nt1.56□□□□□ -2.16
LSM5P40089 KCS1YDR017C 3153 nt1.56□□□□□ -2.16
LSM5P40089 SRP14YDL092W 441 nt1.56□□□□□ -2.16
LSM5P40089 PAU2YEL049W 363 nt1.56□□□□□ -2.16
LSM5P40089 YAR047CYAR047C 321 nt1.56□□□□□ -2.16
LSM5P40089 RPL9BYNL067W 576 nt1.56□□□□□ -2.16
LSM5P40089 MRPL50YNR022C 420 nt1.56□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 10.1 ms