Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 LCD1YDR499W 2244 nt2.54□□□□□ -2
TDP1P38319 YPL216WYPL216W 3309 nt2.54□□□□□ -2
TDP1P38319 YJL070CYJL070C 2667 nt2.54□□□□□ -2
TDP1P38319 HRD3YLR207W 2502 nt2.53□□□□□ -2
TDP1P38319 YPP1YGR198W 2454 nt2.53□□□□□ -2
TDP1P38319 NUM1YDR150W 8247 nt2.53□□□□□ -2
TDP1P38319 YPL150WYPL150W 2706 nt2.53□□□□□ -2
TDP1P38319 YGR050CYGR050C 357 nt2.53□□□□□ -2
TDP1P38319 YBR178WYBR178W 375 nt2.53□□□□□ -2
TDP1P38319 DFG16YOR030W 1860 nt2.53□□□□□ -2
TDP1P38319 IPT1YDR072C 1584 nt2.53□□□□□ -2.01
TDP1P38319 RRP12YPL012W 3687 nt2.52□□□□□ -2.01
TDP1P38319 RLI1YDR091C 1827 nt2.52□□□□□ -2.01
TDP1P38319 MRD1YPR112C 2664 nt2.52□□□□□ -2.01
TDP1P38319 YLR255CYLR255C 354 nt2.52□□□□□ -2.01
TDP1P38319 YBR224WYBR224W 516 nt2.52□□□□□ -2.01
TDP1P38319 AMS1YGL156W 3252 nt2.52□□□□□ -2.01
TDP1P38319 DOT6YER088C 2013 nt2.52□□□□□ -2.01
TDP1P38319 SNU114YKL173W 3027 nt2.51□□□□□ -2.01
TDP1P38319 RTT10YPL183C 3042 nt2.51□□□□□ -2.01
TDP1P38319 YDR426CYDR426C 378 nt2.51□□□□□ -2.01
TDP1P38319 PRE4YFR050C 801 nt2.51□□□□□ -2.01
TDP1P38319 ACB1YGR037C 264 nt2.51□□□□□ -2.01
TDP1P38319 RTC6YPL183W-A 282 nt2.51□□□□□ -2.01
TDP1P38319 ACM1YPL267W 630 nt2.51□□□□□ -2.01
TDP1P38319 BCK1YJL095W 4437 nt2.51□□□□□ -2.01
TDP1P38319 INP51YIL002C 2841 nt2.5□□□□□ -2.01
TDP1P38319 SGM1YJR134C 2124 nt2.5□□□□□ -2.01
TDP1P38319 PDE2YOR360C 1581 nt2.5□□□□□ -2.01
TDP1P38319 YGL014C-AYGL014C-A 162 nt2.5□□□□□ -2.01
TDP1P38319 SMD1YGR074W 441 nt2.5□□□□□ -2.01
TDP1P38319 YNL097C-BYNL097C-B 123 nt2.5□□□□□ -2.01
TDP1P38319 NUT2YPR168W 474 nt2.5□□□□□ -2.01
TDP1P38319 HOS4YIL112W 3252 nt2.5□□□□□ -2.01
TDP1P38319 SAK1YER129W 3429 nt2.5□□□□□ -2.01
TDP1P38319 GUP1YGL084C 1683 nt2.5□□□□□ -2.01
TDP1P38319 TCB2YNL087W 3537 nt2.5□□□□□ -2.01
TDP1P38319 PAN3YKL025C 2040 nt2.49□□□□□ -2.01
TDP1P38319 UBP11YKR098C 2154 nt2.49□□□□□ -2.01
TDP1P38319 SSS1YDR086C 243 nt2.49□□□□□ -2.01
TDP1P38319 YGL217CYGL217C 342 nt2.49□□□□□ -2.01
TDP1P38319 TRX1YLR043C 312 nt2.49□□□□□ -2.01
TDP1P38319 KTI11YBL071W-A 249 nt2.49□□□□□ -2.01
TDP1P38319 LSM7YNL147W 348 nt2.49□□□□□ -2.01
TDP1P38319 ARP8YOR141C 2646 nt2.49□□□□□ -2.01
TDP1P38319 VPS16YPL045W 2397 nt2.49□□□□□ -2.01
TDP1P38319 CDC27YBL084C 2277 nt2.48□□□□□ -2.01
TDP1P38319 ALK2YBL009W 2031 nt2.48□□□□□ -2.01
TDP1P38319 UBP15YMR304W 3693 nt2.48□□□□□ -2.01
TDP1P38319 YDL025W-AYDL025W-A 105 nt2.48□□□□□ -2.01
TDP1P38319 INA22YIR024C 651 nt2.48□□□□□ -2.01
TDP1P38319 YOR376WYOR376W 369 nt2.48□□□□□ -2.01
TDP1P38319 TOF2YKR010C 2316 nt2.48□□□□□ -2.01
TDP1P38319 TRA1YHR099W 11235 nt2.48□□□□□ -2.01
TDP1P38319 PTC5YOR090C 1719 nt2.48□□□□□ -2.01
TDP1P38319 ESL2YKR096W 3588 nt2.48□□□□□ -2.01
TDP1P38319 MPH1YIR002C 2982 nt2.47□□□□□ -2.01
TDP1P38319 SEC26YDR238C 2922 nt2.47□□□□□ -2.01
TDP1P38319 LRE1YCL051W 1752 nt2.47□□□□□ -2.01
TDP1P38319 VTC1YER072W 390 nt2.47□□□□□ -2.01
TDP1P38319 GRX8YLR364W 330 nt2.47□□□□□ -2.01
TDP1P38319 YPR002C-AYPR002C-A 198 nt2.47□□□□□ -2.01
TDP1P38319 YBR182C-AYBR182C-A 195 nt2.47□□□□□ -2.01
TDP1P38319 snR46snR46 197 nt2.47□□□□□ -2.01
TDP1P38319 YBR277CYBR277C 402 nt2.47□□□□□ -2.01
TDP1P38319 TOR1YJR066W 7413 nt2.47□□□□□ -2.01
TDP1P38319 SGD1YLR336C 2700 nt2.47□□□□□ -2.01
TDP1P38319 INP53YOR109W 3324 nt2.46□□□□□ -2.02
TDP1P38319 HSC82YMR186W 2118 nt2.46□□□□□ -2.02
TDP1P38319 YOR055WYOR055W 435 nt2.46□□□□□ -2.02
TDP1P38319 YOR333CYOR333C 417 nt2.46□□□□□ -2.02
TDP1P38319 YEF3YLR249W 3135 nt2.46□□□□□ -2.02
TDP1P38319 SEC5YDR166C 2916 nt2.45□□□□□ -2.02
TDP1P38319 TMN3YER113C 2121 nt2.45□□□□□ -2.02
TDP1P38319 CBF2YGR140W 2871 nt2.45□□□□□ -2.02
TDP1P38319 SWR1YDR334W 4545 nt2.45□□□□□ -2.02
TDP1P38319 FMP16YDR070C 282 nt2.45□□□□□ -2.02
TDP1P38319 YDR286CYDR286C 345 nt2.45□□□□□ -2.02
TDP1P38319 YPR092WYPR092W 306 nt2.45□□□□□ -2.02
TDP1P38319 RPO41YFL036W 4056 nt2.45□□□□□ -2.02
TDP1P38319 MLH1YMR167W 2310 nt2.45□□□□□ -2.02
TDP1P38319 YNL018CYNL018C 1839 nt2.45□□□□□ -2.02
TDP1P38319 YIR030W-AYIR030W-A 384 nt2.44□□□□□ -2.02
TDP1P38319 VPS54YDR027C 2670 nt2.44□□□□□ -2.02
TDP1P38319 DNA2YHR164C 4569 nt2.43□□□□□ -2.02
TDP1P38319 SNC2YOR327C 348 nt2.43□□□□□ -2.02
TDP1P38319 YOR381W-AYOR381W-A 168 nt2.43□□□□□ -2.02
TDP1P38319 YBR131C-AYBR131C-A 90 nt2.43□□□□□ -2.02
TDP1P38319 VMA9YCL005W-A 222 nt2.43□□□□□ -2.02
TDP1P38319 snR52snR52 92 nt2.43□□□□□ -2.02
TDP1P38319 BUB1YGR188C 3066 nt2.43□□□□□ -2.02
TDP1P38319 CUL3YGR003W 2235 nt2.43□□□□□ -2.02
TDP1P38319 RSE1YML049C 4086 nt2.43□□□□□ -2.02
TDP1P38319 TOP2YNL088W 4287 nt2.43□□□□□ -2.02
TDP1P38319 CFT2YLR115W 2580 nt2.43□□□□□ -2.02
TDP1P38319 VPS35YJL154C 2835 nt2.42□□□□□ -2.02
TDP1P38319 ISW1YBR245C 3390 nt2.42□□□□□ -2.02
TDP1P38319 PEX8YGR077C 1770 nt2.42□□□□□ -2.02
TDP1P38319 snR74snR74 88 nt2.42□□□□□ -2.02
TDP1P38319 YDR524C-AYDR524C-A 120 nt2.42□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 20 ms