Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP11P24347 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MMP11P24347 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MMP11P24347 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MMP11P24347 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MMP11P24347 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP11P24347 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MMP11P24347 AP003097.1-201ENST00000530657 1135 ntBASIC19.19■□□□□ 0.66
MMP11P24347 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
MMP11P24347 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MMP11P24347 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
MMP11P24347 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
MMP11P24347 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MMP11P24347 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
MMP11P24347 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP11P24347 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.18■□□□□ 0.66
MMP11P24347 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MMP11P24347 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP11P24347 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.18■□□□□ 0.66
MMP11P24347 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.18■□□□□ 0.66
MMP11P24347 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MMP11P24347 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.18■□□□□ 0.66
MMP11P24347 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MMP11P24347 AC006058.3-201ENST00000606217 1069 ntBASIC19.18■□□□□ 0.66
MMP11P24347 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.18■□□□□ 0.66
MMP11P24347 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MMP11P24347 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.18■□□□□ 0.66
MMP11P24347 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP11P24347 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MMP11P24347 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MMP11P24347 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MMP11P24347 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP11P24347 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP11P24347 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MMP11P24347 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.17■□□□□ 0.66
MMP11P24347 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP11P24347 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP11P24347 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP11P24347 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP11P24347 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP11P24347 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP11P24347 PGM5P4-201ENST00000421970 445 ntBASIC19.17■□□□□ 0.66
MMP11P24347 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP11P24347 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.17■□□□□ 0.66
MMP11P24347 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP11P24347 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MMP11P24347 AC092667.1-201ENST00000434301 2586 ntBASIC19.17■□□□□ 0.66
MMP11P24347 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MMP11P24347 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
MMP11P24347 AC006128.1-201ENST00000624704 1661 ntBASIC19.17■□□□□ 0.66
MMP11P24347 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.17■□□□□ 0.66
MMP11P24347 AC087633.2-202ENST00000565166 1439 ntBASIC19.17■□□□□ 0.66
MMP11P24347 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.16■□□□□ 0.66
MMP11P24347 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MMP11P24347 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MMP11P24347 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MMP11P24347 PLK5-205ENST00000642079 1969 ntBASIC19.16■□□□□ 0.66
MMP11P24347 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.16■□□□□ 0.66
MMP11P24347 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
MMP11P24347 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.16■□□□□ 0.66
MMP11P24347 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.16■□□□□ 0.66
MMP11P24347 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
MMP11P24347 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
MMP11P24347 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.16■□□□□ 0.66
MMP11P24347 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.16■□□□□ 0.66
MMP11P24347 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MMP11P24347 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
MMP11P24347 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.16■□□□□ 0.66
MMP11P24347 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.16■□□□□ 0.66
MMP11P24347 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP11P24347 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MMP11P24347 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.15■□□□□ 0.66
MMP11P24347 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
MMP11P24347 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MMP11P24347 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.15■□□□□ 0.66
MMP11P24347 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.15■□□□□ 0.66
MMP11P24347 AC128676.1-201ENST00000454392 318 ntBASIC19.15■□□□□ 0.66
MMP11P24347 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MMP11P24347 PNMA6B-201ENST00000538162 1200 ntBASIC19.15■□□□□ 0.66
MMP11P24347 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms