Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HOXB3P14651 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXB3P14651 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXB3P14651 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXB3P14651 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXB3P14651 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
HOXB3P14651 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXB3P14651 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXB3P14651 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXB3P14651 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXB3P14651 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXB3P14651 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HOXB3P14651 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HOXB3P14651 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXB3P14651 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXB3P14651 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXB3P14651 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXB3P14651 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXB3P14651 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.78■□□□□ 0.76
HOXB3P14651 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXB3P14651 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXB3P14651 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXB3P14651 PLK5-205ENST00000642079 1969 ntBASIC19.78■□□□□ 0.76
HOXB3P14651 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXB3P14651 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.78■□□□□ 0.76
HOXB3P14651 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXB3P14651 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXB3P14651 AC098799.1-201ENST00000504752 800 ntBASIC19.78■□□□□ 0.76
HOXB3P14651 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC19.78■□□□□ 0.76
HOXB3P14651 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXB3P14651 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXB3P14651 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HOXB3P14651 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXB3P14651 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXB3P14651 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXB3P14651 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXB3P14651 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXB3P14651 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXB3P14651 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.77■□□□□ 0.76
HOXB3P14651 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
HOXB3P14651 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXB3P14651 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXB3P14651 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXB3P14651 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXB3P14651 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXB3P14651 PNMA6B-201ENST00000538162 1200 ntBASIC19.77■□□□□ 0.76
HOXB3P14651 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXB3P14651 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXB3P14651 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXB3P14651 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXB3P14651 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXB3P14651 AC092368.3-202ENST00000574180 1591 ntBASIC19.77■□□□□ 0.76
HOXB3P14651 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.77■□□□□ 0.75
HOXB3P14651 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.77■□□□□ 0.75
HOXB3P14651 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
HOXB3P14651 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HOXB3P14651 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HOXB3P14651 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXB3P14651 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXB3P14651 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXB3P14651 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXB3P14651 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXB3P14651 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXB3P14651 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXB3P14651 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
HOXB3P14651 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXB3P14651 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.76■□□□□ 0.75
HOXB3P14651 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXB3P14651 AC105020.6-201ENST00000621523 1217 ntBASIC19.76■□□□□ 0.75
HOXB3P14651 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXB3P14651 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXB3P14651 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXB3P14651 KRT17P2-201ENST00000300992 1314 ntBASIC19.76■□□□□ 0.75
HOXB3P14651 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
HOXB3P14651 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXB3P14651 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXB3P14651 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
HOXB3P14651 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXB3P14651 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HOXB3P14651 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXB3P14651 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HOXB3P14651 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXB3P14651 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.75■□□□□ 0.75
HOXB3P14651 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HOXB3P14651 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms