Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH1P12830 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH1P12830 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH1P12830 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH1P12830 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CDH1P12830 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH1P12830 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
CDH1P12830 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDH1P12830 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH1P12830 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH1P12830 CYP21A1P-202ENST00000354927 1481 ntBASIC19.69■□□□□ 0.74
CDH1P12830 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH1P12830 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH1P12830 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH1P12830 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH1P12830 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH1P12830 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH1P12830 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH1P12830 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH1P12830 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDH1P12830 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH1P12830 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH1P12830 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.68■□□□□ 0.74
CDH1P12830 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.68■□□□□ 0.74
CDH1P12830 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH1P12830 OR10C1-204ENST00000622521 1039 ntBASIC19.68■□□□□ 0.74
CDH1P12830 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH1P12830 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH1P12830 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH1P12830 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH1P12830 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH1P12830 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH1P12830 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH1P12830 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH1P12830 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH1P12830 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH1P12830 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH1P12830 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CDH1P12830 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH1P12830 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH1P12830 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH1P12830 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH1P12830 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CDH1P12830 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH1P12830 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH1P12830 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH1P12830 AC006970.2-201ENST00000450065 779 ntBASIC19.67■□□□□ 0.74
CDH1P12830 AC093787.1-201ENST00000450396 207 ntBASIC19.67■□□□□ 0.74
CDH1P12830 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CDH1P12830 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH1P12830 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH1P12830 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH1P12830 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH1P12830 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH1P12830 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH1P12830 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH1P12830 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CDH1P12830 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH1P12830 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH1P12830 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH1P12830 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH1P12830 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH1P12830 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CDH1P12830 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH1P12830 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.66■□□□□ 0.74
CDH1P12830 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH1P12830 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CDH1P12830 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH1P12830 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH1P12830 AC087633.2-202ENST00000565166 1439 ntBASIC19.66■□□□□ 0.74
CDH1P12830 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH1P12830 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH1P12830 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDH1P12830 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CDH1P12830 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDH1P12830 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH1P12830 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH1P12830 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH1P12830 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDH1P12830 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH1P12830 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH1P12830 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH1P12830 MCRIP2P1-201ENST00000394346 511 ntBASIC19.65■□□□□ 0.74
CDH1P12830 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH1P12830 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH1P12830 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.65■□□□□ 0.74
CDH1P12830 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH1P12830 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH1P12830 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH1P12830 AC133552.2-202ENST00000575694 574 ntBASIC19.65■□□□□ 0.74
CDH1P12830 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH1P12830 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDH1P12830 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH1P12830 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH1P12830 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH1P12830 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDH1P12830 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CDH1P12830 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDH1P12830 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH1P12830 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms