Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNB1P11230 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.58■□□□□ 0.88
CHRNB1P11230 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.58■□□□□ 0.88
CHRNB1P11230 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CHRNB1P11230 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNB1P11230 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNB1P11230 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CHRNB1P11230 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNB1P11230 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CHRNB1P11230 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB1P11230 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CHRNB1P11230 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHRNB1P11230 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB1P11230 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB1P11230 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB1P11230 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB1P11230 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB1P11230 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.57■□□□□ 0.88
CHRNB1P11230 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB1P11230 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB1P11230 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB1P11230 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB1P11230 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CHRNB1P11230 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CHRNB1P11230 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB1P11230 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB1P11230 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB1P11230 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.56■□□□□ 0.88
CHRNB1P11230 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB1P11230 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB1P11230 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB1P11230 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.56■□□□□ 0.88
CHRNB1P11230 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CHRNB1P11230 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.56■□□□□ 0.88
CHRNB1P11230 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHRNB1P11230 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNB1P11230 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CHRNB1P11230 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB1P11230 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB1P11230 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.55■□□□□ 0.88
CHRNB1P11230 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CHRNB1P11230 AL353807.1-201ENST00000427475 662 ntBASIC20.55■□□□□ 0.88
CHRNB1P11230 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB1P11230 KRT18P35-201ENST00000510488 1269 ntBASIC20.55■□□□□ 0.88
CHRNB1P11230 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNB1P11230 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB1P11230 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNB1P11230 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB1P11230 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CHRNB1P11230 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB1P11230 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB1P11230 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB1P11230 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRNB1P11230 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB1P11230 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB1P11230 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.54■□□□□ 0.88
CHRNB1P11230 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB1P11230 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.54■□□□□ 0.88
CHRNB1P11230 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.54■□□□□ 0.88
CHRNB1P11230 FAM197Y1-201ENST00000421178 764 ntBASIC20.54■□□□□ 0.88
CHRNB1P11230 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRNB1P11230 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.54■□□□□ 0.88
CHRNB1P11230 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.54■□□□□ 0.88
CHRNB1P11230 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CHRNB1P11230 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB1P11230 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHRNB1P11230 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRNB1P11230 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.54■□□□□ 0.88
CHRNB1P11230 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.54■□□□□ 0.88
CHRNB1P11230 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.54■□□□□ 0.88
CHRNB1P11230 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB1P11230 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB1P11230 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.54■□□□□ 0.88
CHRNB1P11230 NBPF21P-201ENST00000425093 1451 ntBASIC20.54■□□□□ 0.88
CHRNB1P11230 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CHRNB1P11230 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB1P11230 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRNB1P11230 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNB1P11230 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRNB1P11230 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNB1P11230 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNB1P11230 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.53■□□□□ 0.88
CHRNB1P11230 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRNB1P11230 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.53■□□□□ 0.88
CHRNB1P11230 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.53■□□□□ 0.88
CHRNB1P11230 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNB1P11230 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNB1P11230 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNB1P11230 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRNB1P11230 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNB1P11230 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNB1P11230 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CHRNB1P11230 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNB1P11230 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CHRNB1P11230 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRNB1P11230 AC023632.3-201ENST00000521633 145 ntBASIC20.52■□□□□ 0.88
CHRNB1P11230 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHRNB1P11230 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRNB1P11230 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.52■□□□□ 0.88
CHRNB1P11230 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms