Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2AFB1P0C5Y9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFB1P0C5Y9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 AC125437.2-201ENST00000625180 2167 ntBASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 BHLHE23-202ENST00000612929 1109 ntBASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 AC087239.1-201ENST00000622671 572 ntBASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.29■□□□□ 0.2
H2AFB1P0C5Y9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFB1P0C5Y9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms