Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.43■□□□□ 0.86
RETP07949 AC092865.7-201ENST00000641832 219 ntBASIC20.43■□□□□ 0.86
RETP07949 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RETP07949 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 CYP21A1P-202ENST00000354927 1481 ntBASIC20.43■□□□□ 0.86
RETP07949 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RETP07949 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
RETP07949 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RETP07949 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.42■□□□□ 0.86
RETP07949 C2orf69P4-201ENST00000565394 541 ntBASIC20.42■□□□□ 0.86
RETP07949 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.42■□□□□ 0.86
RETP07949 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
RETP07949 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RETP07949 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
RETP07949 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RETP07949 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RETP07949 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RETP07949 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.41■□□□□ 0.86
RETP07949 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RETP07949 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RETP07949 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RETP07949 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RETP07949 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RETP07949 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RETP07949 AC026471.5-201ENST00000615068 467 ntBASIC20.41■□□□□ 0.86
RETP07949 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RETP07949 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RETP07949 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RETP07949 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RETP07949 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.41■□□□□ 0.86
RETP07949 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.41■□□□□ 0.86
RETP07949 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETP07949 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETP07949 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETP07949 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETP07949 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RETP07949 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETP07949 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RETP07949 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RETP07949 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
RETP07949 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
RETP07949 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RETP07949 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RETP07949 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RETP07949 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
RETP07949 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.39■□□□□ 0.85
RETP07949 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
RETP07949 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.39■□□□□ 0.85
RETP07949 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.39■□□□□ 0.85
RETP07949 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.39■□□□□ 0.85
RETP07949 AP003071.4-201ENST00000562276 1284 ntBASIC20.39■□□□□ 0.85
RETP07949 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.39■□□□□ 0.85
RETP07949 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 AC005229.4-201ENST00000610085 2198 ntBASIC20.39■□□□□ 0.85
RETP07949 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.39■□□□□ 0.85
RETP07949 AC003102.1-202ENST00000563394 1796 ntBASIC20.39■□□□□ 0.85
RETP07949 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.39■□□□□ 0.85
RETP07949 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RETP07949 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.38■□□□□ 0.85
RETP07949 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RETP07949 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETP07949 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.38■□□□□ 0.85
RETP07949 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RETP07949 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETP07949 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RETP07949 PKD1P6-201ENST00000343738 4769 ntBASIC20.38■□□□□ 0.85
RETP07949 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETP07949 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RETP07949 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms