Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
KRT6AP02538 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT6AP02538 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT6AP02538 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT6AP02538 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
KRT6AP02538 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.57■□□□□ 0.72
KRT6AP02538 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
KRT6AP02538 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.57■□□□□ 0.72
KRT6AP02538 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT6AP02538 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
KRT6AP02538 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
KRT6AP02538 AL591742.1-201ENST00000604433 565 ntBASIC19.57■□□□□ 0.72
KRT6AP02538 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT6AP02538 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT6AP02538 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
KRT6AP02538 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.57■□□□□ 0.72
KRT6AP02538 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT6AP02538 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT6AP02538 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT6AP02538 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT6AP02538 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRT6AP02538 AC112907.3-201ENST00000577781 2400 ntBASIC19.56■□□□□ 0.72
KRT6AP02538 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT6AP02538 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT6AP02538 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT6AP02538 SMG8-203ENST00000578922 2178 ntBASIC19.56■□□□□ 0.72
KRT6AP02538 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
KRT6AP02538 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT6AP02538 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.56■□□□□ 0.72
KRT6AP02538 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
KRT6AP02538 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.56■□□□□ 0.72
KRT6AP02538 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT6AP02538 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.56■□□□□ 0.72
KRT6AP02538 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.56■□□□□ 0.72
KRT6AP02538 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.56■□□□□ 0.72
KRT6AP02538 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT6AP02538 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.56■□□□□ 0.72
KRT6AP02538 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT6AP02538 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT6AP02538 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT6AP02538 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT6AP02538 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT6AP02538 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT6AP02538 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
KRT6AP02538 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT6AP02538 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.55■□□□□ 0.72
KRT6AP02538 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT6AP02538 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT6AP02538 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.55■□□□□ 0.72
KRT6AP02538 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.55■□□□□ 0.72
KRT6AP02538 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.55■□□□□ 0.72
KRT6AP02538 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
KRT6AP02538 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT6AP02538 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT6AP02538 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT6AP02538 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
KRT6AP02538 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
KRT6AP02538 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
KRT6AP02538 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.54■□□□□ 0.72
KRT6AP02538 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
KRT6AP02538 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.54■□□□□ 0.72
KRT6AP02538 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.54■□□□□ 0.72
KRT6AP02538 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
KRT6AP02538 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
KRT6AP02538 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.54■□□□□ 0.72
KRT6AP02538 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.54■□□□□ 0.72
KRT6AP02538 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.54■□□□□ 0.72
KRT6AP02538 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.54■□□□□ 0.72
KRT6AP02538 AC087623.3-201ENST00000607047 1098 ntBASIC19.54■□□□□ 0.72
KRT6AP02538 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.54■□□□□ 0.72
KRT6AP02538 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
KRT6AP02538 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.54■□□□□ 0.72
KRT6AP02538 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.54■□□□□ 0.72
KRT6AP02538 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT6AP02538 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6AP02538 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6AP02538 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
KRT6AP02538 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.53■□□□□ 0.72
KRT6AP02538 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6AP02538 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6AP02538 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6AP02538 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6AP02538 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.53■□□□□ 0.72
KRT6AP02538 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.53■□□□□ 0.72
KRT6AP02538 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.53■□□□□ 0.72
KRT6AP02538 AC137761.2-201ENST00000561729 223 ntBASIC19.53■□□□□ 0.72
KRT6AP02538 AL162412.1-201ENST00000567129 965 ntBASIC19.53■□□□□ 0.72
KRT6AP02538 AC145350.3-201ENST00000569033 163 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms