Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.01■□□□□ 0.15
IFNA1P01562 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.01■□□□□ 0.15
IFNA1P01562 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.01■□□□□ 0.15
IFNA1P01562 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.01■□□□□ 0.15
IFNA1P01562 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFNA1P01562 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.01■□□□□ 0.15
IFNA1P01562 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFNA1P01562 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IFNA1P01562 AP006587.3-201ENST00000525742 1516 ntBASIC16.01■□□□□ 0.15
IFNA1P01562 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
IFNA1P01562 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.01■□□□□ 0.15
IFNA1P01562 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IFNA1P01562 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.01■□□□□ 0.15
IFNA1P01562 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.01■□□□□ 0.15
IFNA1P01562 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
IFNA1P01562 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
IFNA1P01562 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
IFNA1P01562 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFNA1P01562 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.01■□□□□ 0.15
IFNA1P01562 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IFNA1P01562 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IFNA1P01562 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16■□□□□ 0.15
IFNA1P01562 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
IFNA1P01562 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16■□□□□ 0.15
IFNA1P01562 DUX4L18-201ENST00000553347 1267 ntBASIC16■□□□□ 0.15
IFNA1P01562 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
IFNA1P01562 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
IFNA1P01562 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
IFNA1P01562 AC125437.2-201ENST00000625180 2167 ntBASIC16■□□□□ 0.15
IFNA1P01562 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
IFNA1P01562 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16■□□□□ 0.15
IFNA1P01562 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16■□□□□ 0.15
IFNA1P01562 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.99■□□□□ 0.15
IFNA1P01562 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.99■□□□□ 0.15
IFNA1P01562 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
IFNA1P01562 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.99■□□□□ 0.15
IFNA1P01562 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
IFNA1P01562 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.99■□□□□ 0.15
IFNA1P01562 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.99■□□□□ 0.15
IFNA1P01562 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
IFNA1P01562 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
IFNA1P01562 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 AC137630.3-201ENST00000607245 391 ntBASIC15.99■□□□□ 0.15
IFNA1P01562 U85056.1-201ENST00000616429 682 ntBASIC15.99■□□□□ 0.15
IFNA1P01562 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.99■□□□□ 0.15
IFNA1P01562 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
IFNA1P01562 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.99■□□□□ 0.15
IFNA1P01562 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.99■□□□□ 0.15
IFNA1P01562 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.99■□□□□ 0.15
IFNA1P01562 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IFNA1P01562 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFNA1P01562 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IFNA1P01562 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.98■□□□□ 0.15
IFNA1P01562 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
IFNA1P01562 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.98■□□□□ 0.15
IFNA1P01562 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IFNA1P01562 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFNA1P01562 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
IFNA1P01562 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFNA1P01562 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
IFNA1P01562 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.98■□□□□ 0.15
IFNA1P01562 KRT18P60-201ENST00000312876 1297 ntBASIC15.98■□□□□ 0.15
IFNA1P01562 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
IFNA1P01562 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFNA1P01562 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFNA1P01562 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
IFNA1P01562 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.98■□□□□ 0.15
IFNA1P01562 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFNA1P01562 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.98■□□□□ 0.15
IFNA1P01562 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
IFNA1P01562 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFNA1P01562 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.98■□□□□ 0.15
IFNA1P01562 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms