Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.49■□□□□ 0.87
PDGFBP01127 NIFKP9-201ENST00000419265 221 ntBASIC20.49■□□□□ 0.87
PDGFBP01127 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFBP01127 KSR1P1-201ENST00000446298 240 ntBASIC20.49■□□□□ 0.87
PDGFBP01127 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.49■□□□□ 0.87
PDGFBP01127 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFBP01127 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.49■□□□□ 0.87
PDGFBP01127 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.49■□□□□ 0.87
PDGFBP01127 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.49■□□□□ 0.87
PDGFBP01127 MYC-208ENST00000641036 567 ntBASIC20.49■□□□□ 0.87
PDGFBP01127 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFBP01127 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFBP01127 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFBP01127 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDGFBP01127 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFBP01127 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PDGFBP01127 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFBP01127 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFBP01127 INGX-201ENST00000359239 846 ntBASIC20.48■□□□□ 0.87
PDGFBP01127 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.48■□□□□ 0.87
PDGFBP01127 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PDGFBP01127 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFBP01127 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PDGFBP01127 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PDGFBP01127 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
PDGFBP01127 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.48■□□□□ 0.87
PDGFBP01127 AL031133.1-201ENST00000406807 723 ntBASIC20.48■□□□□ 0.87
PDGFBP01127 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.48■□□□□ 0.87
PDGFBP01127 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFBP01127 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.48■□□□□ 0.87
PDGFBP01127 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.48■□□□□ 0.87
PDGFBP01127 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PDGFBP01127 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFBP01127 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFBP01127 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDGFBP01127 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFBP01127 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.47■□□□□ 0.87
PDGFBP01127 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFBP01127 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.47■□□□□ 0.87
PDGFBP01127 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFBP01127 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.47■□□□□ 0.87
PDGFBP01127 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.47■□□□□ 0.87
PDGFBP01127 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.47■□□□□ 0.87
PDGFBP01127 AC117947.1-201ENST00000427448 529 ntBASIC20.47■□□□□ 0.87
PDGFBP01127 AC009947.2-201ENST00000444014 672 ntBASIC20.47■□□□□ 0.87
PDGFBP01127 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.47■□□□□ 0.87
PDGFBP01127 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.47■□□□□ 0.87
PDGFBP01127 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.47■□□□□ 0.87
PDGFBP01127 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.47■□□□□ 0.87
PDGFBP01127 AL121906.2-201ENST00000621597 723 ntBASIC20.47■□□□□ 0.87
PDGFBP01127 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PDGFBP01127 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.47■□□□□ 0.87
PDGFBP01127 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFBP01127 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDGFBP01127 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFBP01127 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.46■□□□□ 0.87
PDGFBP01127 AC080038.3-201ENST00000623346 1952 ntBASIC20.46■□□□□ 0.87
PDGFBP01127 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFBP01127 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFBP01127 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.46■□□□□ 0.87
PDGFBP01127 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFBP01127 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFBP01127 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFBP01127 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFBP01127 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFBP01127 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFBP01127 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.46■□□□□ 0.87
PDGFBP01127 BX664615.1-201ENST00000443558 458 ntBASIC20.46■□□□□ 0.87
PDGFBP01127 FAM99A-202ENST00000538190 1989 ntBASIC20.46■□□□□ 0.87
PDGFBP01127 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFBP01127 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PDGFBP01127 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.46■□□□□ 0.87
PDGFBP01127 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDGFBP01127 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.45■□□□□ 0.87
PDGFBP01127 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFBP01127 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.45■□□□□ 0.86
PDGFBP01127 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.45■□□□□ 0.86
PDGFBP01127 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
PDGFBP01127 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
PDGFBP01127 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFBP01127 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFBP01127 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.45■□□□□ 0.86
PDGFBP01127 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFBP01127 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFBP01127 C2orf69P3-201ENST00000565542 1120 ntBASIC20.45■□□□□ 0.86
PDGFBP01127 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFBP01127 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.45■□□□□ 0.86
PDGFBP01127 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFBP01127 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFBP01127 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDGFBP01127 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFBP01127 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PDGFBP01127 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFBP01127 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDGFBP01127 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.44■□□□□ 0.86
PDGFBP01127 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.44■□□□□ 0.86
PDGFBP01127 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
PDGFBP01127 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
PDGFBP01127 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.44■□□□□ 0.86
PDGFBP01127 LINC01238-205ENST00000567549 1107 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms