Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSPG5O95196 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.75■■□□□ 1.07
CSPG5O95196 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSPG5O95196 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.75■■□□□ 1.07
CSPG5O95196 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSPG5O95196 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CSPG5O95196 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.74■■□□□ 1.07
CSPG5O95196 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG5O95196 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG5O95196 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG5O95196 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CSPG5O95196 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.74■■□□□ 1.07
CSPG5O95196 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.74■■□□□ 1.07
CSPG5O95196 RN7SL850P-201ENST00000579959 291 ntBASIC21.74■■□□□ 1.07
CSPG5O95196 AL445228.2-201ENST00000605589 952 ntBASIC21.74■■□□□ 1.07
CSPG5O95196 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG5O95196 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG5O95196 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG5O95196 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.74■■□□□ 1.07
CSPG5O95196 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG5O95196 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG5O95196 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.73■■□□□ 1.07
CSPG5O95196 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.73■■□□□ 1.07
CSPG5O95196 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.73■■□□□ 1.07
CSPG5O95196 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.73■■□□□ 1.07
CSPG5O95196 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.73■■□□□ 1.07
CSPG5O95196 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.73■■□□□ 1.07
CSPG5O95196 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.73■■□□□ 1.07
CSPG5O95196 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.73■■□□□ 1.07
CSPG5O95196 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CSPG5O95196 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 AC124283.5-201ENST00000624661 1809 ntBASIC21.73■■□□□ 1.07
CSPG5O95196 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.73■■□□□ 1.07
CSPG5O95196 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG5O95196 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.72■■□□□ 1.07
CSPG5O95196 AL135905.2-201ENST00000584934 1404 ntBASIC21.72■■□□□ 1.07
CSPG5O95196 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
CSPG5O95196 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG5O95196 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG5O95196 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.72■■□□□ 1.07
CSPG5O95196 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.72■■□□□ 1.07
CSPG5O95196 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG5O95196 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG5O95196 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG5O95196 TMPOP1-202ENST00000424642 1267 ntBASIC21.72■■□□□ 1.07
CSPG5O95196 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG5O95196 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.72■■□□□ 1.07
CSPG5O95196 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG5O95196 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.72■■□□□ 1.07
CSPG5O95196 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.72■■□□□ 1.07
CSPG5O95196 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.72■■□□□ 1.07
CSPG5O95196 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG5O95196 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG5O95196 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CSPG5O95196 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG5O95196 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.71■■□□□ 1.07
CSPG5O95196 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG5O95196 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CSPG5O95196 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG5O95196 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CSPG5O95196 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG5O95196 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.71■■□□□ 1.07
CSPG5O95196 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG5O95196 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG5O95196 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG5O95196 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
CSPG5O95196 AL356652.1-201ENST00000615962 565 ntBASIC21.71■■□□□ 1.07
CSPG5O95196 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CSPG5O95196 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG5O95196 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CSPG5O95196 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG5O95196 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG5O95196 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG5O95196 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
CSPG5O95196 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSPG5O95196 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.7■■□□□ 1.06
CSPG5O95196 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CSPG5O95196 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.7■■□□□ 1.06
CSPG5O95196 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.7■■□□□ 1.06
CSPG5O95196 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.7■■□□□ 1.06
CSPG5O95196 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSPG5O95196 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSPG5O95196 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.7■■□□□ 1.06
CSPG5O95196 AC026471.5-201ENST00000615068 467 ntBASIC21.7■■□□□ 1.06
CSPG5O95196 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSPG5O95196 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CSPG5O95196 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSPG5O95196 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CSPG5O95196 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms