Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SNCGO76070 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCGO76070 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNCGO76070 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCGO76070 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCGO76070 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCGO76070 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.63□□□□□ -0.23
SNCGO76070 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCGO76070 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCGO76070 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCGO76070 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCGO76070 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.63□□□□□ -0.23
SNCGO76070 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
SNCGO76070 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC13.62□□□□□ -0.23
SNCGO76070 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SNCGO76070 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
SNCGO76070 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SNCGO76070 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.62□□□□□ -0.23
SNCGO76070 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
SNCGO76070 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SNCGO76070 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC13.62□□□□□ -0.23
SNCGO76070 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SNCGO76070 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SNCGO76070 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SNCGO76070 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCGO76070 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
SNCGO76070 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.61□□□□□ -0.23
SNCGO76070 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.61□□□□□ -0.23
SNCGO76070 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 AC007613.1-201ENST00000572811 2597 ntBASIC13.61□□□□□ -0.23
SNCGO76070 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.61□□□□□ -0.23
SNCGO76070 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SNCGO76070 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.61□□□□□ -0.23
SNCGO76070 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC13.61□□□□□ -0.23
SNCGO76070 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SNCGO76070 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SNCGO76070 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SNCGO76070 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC13.61□□□□□ -0.23
SNCGO76070 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SNCGO76070 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.61□□□□□ -0.23
SNCGO76070 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCGO76070 AC138969.2-201ENST00000532739 9932 ntBASIC13.6□□□□□ -0.23
SNCGO76070 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SNCGO76070 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SNCGO76070 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.6□□□□□ -0.23
SNCGO76070 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.6□□□□□ -0.23
SNCGO76070 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SNCGO76070 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 METRNL-202ENST00000570778 967 ntTSL 5 BASIC13.6□□□□□ -0.23
SNCGO76070 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
SNCGO76070 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC13.6□□□□□ -0.23
SNCGO76070 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms