Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 COX11P1-201ENST00000489116 835 ntBASIC9.11□□□□□ -0.95
USH2AO75445 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC9.11□□□□□ -0.95
USH2AO75445 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC9.11□□□□□ -0.95
USH2AO75445 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC9.11□□□□□ -0.95
USH2AO75445 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC9.11□□□□□ -0.95
USH2AO75445 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC9.11□□□□□ -0.95
USH2AO75445 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC9.11□□□□□ -0.95
USH2AO75445 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC9.11□□□□□ -0.95
USH2AO75445 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC9.11□□□□□ -0.95
USH2AO75445 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 PPP1R14BP5-201ENST00000440334 435 ntBASIC9.11□□□□□ -0.95
USH2AO75445 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC9.11□□□□□ -0.95
USH2AO75445 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
USH2AO75445 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
USH2AO75445 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
USH2AO75445 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC9.11□□□□□ -0.95
USH2AO75445 MIR3180-1-201ENST00000580374 94 ntBASIC9.11□□□□□ -0.95
USH2AO75445 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC9.11□□□□□ -0.95
USH2AO75445 MIR3180-3-201ENST00000584616 94 ntBASIC9.11□□□□□ -0.95
USH2AO75445 DGCR10-201ENST00000609839 495 ntBASIC9.11□□□□□ -0.95
USH2AO75445 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC9.11□□□□□ -0.95
USH2AO75445 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
USH2AO75445 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
USH2AO75445 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC9.11□□□□□ -0.95
USH2AO75445 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
USH2AO75445 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
USH2AO75445 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
USH2AO75445 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
USH2AO75445 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC9.1□□□□□ -0.95
USH2AO75445 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC9.1□□□□□ -0.95
USH2AO75445 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
USH2AO75445 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
USH2AO75445 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC9.1□□□□□ -0.95
USH2AO75445 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
USH2AO75445 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
USH2AO75445 HMGA1P5-201ENST00000412453 271 ntBASIC9.1□□□□□ -0.95
USH2AO75445 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC9.1□□□□□ -0.95
USH2AO75445 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
USH2AO75445 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC9.1□□□□□ -0.95
USH2AO75445 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC9.1□□□□□ -0.95
USH2AO75445 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
USH2AO75445 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
USH2AO75445 ANOS2P-203ENST00000472227 1816 ntBASIC9.1□□□□□ -0.95
USH2AO75445 HMGN1P19-201ENST00000436976 333 ntBASIC9.1□□□□□ -0.95
USH2AO75445 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC9.1□□□□□ -0.95
USH2AO75445 AC104692.2-201ENST00000603054 253 ntBASIC9.1□□□□□ -0.95
USH2AO75445 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC9.1□□□□□ -0.95
USH2AO75445 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
USH2AO75445 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC9.1□□□□□ -0.95
USH2AO75445 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC9.1□□□□□ -0.95
USH2AO75445 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
USH2AO75445 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
USH2AO75445 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC9.1□□□□□ -0.95
USH2AO75445 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC9.1□□□□□ -0.95
USH2AO75445 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC9.1□□□□□ -0.95
USH2AO75445 AL121829.2-201ENST00000620908 328 ntBASIC9.1□□□□□ -0.95
USH2AO75445 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC9.1□□□□□ -0.95
USH2AO75445 C11orf96-202ENST00000528572 1834 ntBASIC9.1□□□□□ -0.95
USH2AO75445 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
USH2AO75445 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
USH2AO75445 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 AL022342.1-201ENST00000400363 863 ntBASIC9.09□□□□□ -0.95
USH2AO75445 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC9.09□□□□□ -0.95
USH2AO75445 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC9.09□□□□□ -0.95
USH2AO75445 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC9.09□□□□□ -0.95
USH2AO75445 CLN6-221ENST00000637494 765 ntTSL 5 BASIC9.09□□□□□ -0.95
USH2AO75445 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC9.09□□□□□ -0.95
USH2AO75445 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC9.09□□□□□ -0.95
USH2AO75445 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 LIN28AP1-201ENST00000429574 405 ntBASIC9.09□□□□□ -0.95
USH2AO75445 SKP2-204ENST00000508514 821 ntTSL 3 BASIC9.09□□□□□ -0.95
USH2AO75445 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC9.09□□□□□ -0.95
USH2AO75445 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
USH2AO75445 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC9.09□□□□□ -0.95
USH2AO75445 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC9.09□□□□□ -0.95
USH2AO75445 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 AC008040.2-201ENST00000461049 708 ntBASIC9.09□□□□□ -0.95
USH2AO75445 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
USH2AO75445 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
USH2AO75445 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC9.09□□□□□ -0.95
USH2AO75445 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC9.09□□□□□ -0.95
USH2AO75445 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms