Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC142381.4-202ENST00000563973 229 ntBASIC19.38■□□□□ 0.69
CPNE3O75131 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE3O75131 C2orf69P4-201ENST00000565394 541 ntBASIC19.38■□□□□ 0.69
CPNE3O75131 AC008403.3-201ENST00000598924 454 ntBASIC19.38■□□□□ 0.69
CPNE3O75131 AC244015.2-201ENST00000616358 1861 ntBASIC19.38■□□□□ 0.69
CPNE3O75131 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE3O75131 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CPNE3O75131 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE3O75131 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE3O75131 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE3O75131 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE3O75131 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE3O75131 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CPNE3O75131 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE3O75131 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
CPNE3O75131 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.37■□□□□ 0.69
CPNE3O75131 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE3O75131 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE3O75131 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE3O75131 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CPNE3O75131 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPNE3O75131 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.36■□□□□ 0.69
CPNE3O75131 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.36■□□□□ 0.69
CPNE3O75131 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CPNE3O75131 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.36■□□□□ 0.69
CPNE3O75131 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE3O75131 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE3O75131 SOX15-203ENST00000570788 1093 ntBASIC19.36■□□□□ 0.69
CPNE3O75131 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.36■□□□□ 0.69
CPNE3O75131 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.36■□□□□ 0.69
CPNE3O75131 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE3O75131 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE3O75131 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE3O75131 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE3O75131 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.35■□□□□ 0.69
CPNE3O75131 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE3O75131 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE3O75131 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.35■□□□□ 0.69
CPNE3O75131 KRT17P3-201ENST00000420566 1262 ntBASIC19.35■□□□□ 0.69
CPNE3O75131 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.35■□□□□ 0.69
CPNE3O75131 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.35■□□□□ 0.69
CPNE3O75131 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.35■□□□□ 0.69
CPNE3O75131 AL356652.1-201ENST00000615962 565 ntBASIC19.35■□□□□ 0.69
CPNE3O75131 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CPNE3O75131 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE3O75131 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE3O75131 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE3O75131 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE3O75131 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE3O75131 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CPNE3O75131 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE3O75131 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE3O75131 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE3O75131 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE3O75131 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CPNE3O75131 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE3O75131 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE3O75131 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE3O75131 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CPNE3O75131 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE3O75131 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.34■□□□□ 0.69
CPNE3O75131 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.34■□□□□ 0.69
CPNE3O75131 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE3O75131 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CPNE3O75131 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CPNE3O75131 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE3O75131 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CPNE3O75131 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE3O75131 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE3O75131 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE3O75131 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE3O75131 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE3O75131 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.33■□□□□ 0.69
CPNE3O75131 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE3O75131 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE3O75131 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CPNE3O75131 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE3O75131 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.33■□□□□ 0.69
CPNE3O75131 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE3O75131 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE3O75131 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms