Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PFDN1O60925 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PFDN1O60925 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PFDN1O60925 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PFDN1O60925 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
PFDN1O60925 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.13■□□□□ 0.49
PFDN1O60925 AP004607.7-201ENST00000527152 1677 ntBASIC18.13■□□□□ 0.49
PFDN1O60925 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PFDN1O60925 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.13■□□□□ 0.49
PFDN1O60925 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 AC135050.7-201ENST00000624508 2218 ntBASIC18.13■□□□□ 0.49
PFDN1O60925 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PFDN1O60925 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.13■□□□□ 0.49
PFDN1O60925 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PFDN1O60925 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.13■□□□□ 0.49
PFDN1O60925 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
PFDN1O60925 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.13■□□□□ 0.49
PFDN1O60925 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
PFDN1O60925 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PFDN1O60925 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.12■□□□□ 0.49
PFDN1O60925 AC124067.4-201ENST00000519691 2379 ntBASIC18.12■□□□□ 0.49
PFDN1O60925 AC126177.7-201ENST00000547904 679 ntBASIC18.12■□□□□ 0.49
PFDN1O60925 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.12■□□□□ 0.49
PFDN1O60925 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PFDN1O60925 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PFDN1O60925 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PFDN1O60925 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PFDN1O60925 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PFDN1O60925 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PFDN1O60925 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 NOC2LP2-201ENST00000407594 1944 ntBASIC18.11■□□□□ 0.49
PFDN1O60925 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.11■□□□□ 0.49
PFDN1O60925 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.11■□□□□ 0.49
PFDN1O60925 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.11■□□□□ 0.49
PFDN1O60925 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PFDN1O60925 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 AC009053.2-201ENST00000563701 2365 ntBASIC18.11■□□□□ 0.49
PFDN1O60925 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.11■□□□□ 0.49
PFDN1O60925 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PFDN1O60925 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PFDN1O60925 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 AC093484.2-201ENST00000580996 2166 ntBASIC18.1■□□□□ 0.49
PFDN1O60925 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.1■□□□□ 0.49
PFDN1O60925 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PFDN1O60925 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.1■□□□□ 0.49
PFDN1O60925 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PFDN1O60925 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.1■□□□□ 0.49
PFDN1O60925 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PFDN1O60925 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.1■□□□□ 0.49
PFDN1O60925 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PFDN1O60925 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PFDN1O60925 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PFDN1O60925 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.09■□□□□ 0.49
PFDN1O60925 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.09■□□□□ 0.49
PFDN1O60925 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.09■□□□□ 0.49
PFDN1O60925 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PFDN1O60925 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.09■□□□□ 0.49
PFDN1O60925 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.09■□□□□ 0.49
PFDN1O60925 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
PFDN1O60925 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PFDN1O60925 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.09■□□□□ 0.49
PFDN1O60925 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms