Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCN1O60741 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HCN1O60741 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.85■□□□□ 0.61
HCN1O60741 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCN1O60741 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.84■□□□□ 0.61
HCN1O60741 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCN1O60741 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCN1O60741 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HCN1O60741 GABARAPL3-202ENST00000624044 1851 ntBASIC18.84■□□□□ 0.61
HCN1O60741 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HCN1O60741 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.84■□□□□ 0.61
HCN1O60741 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HCN1O60741 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HCN1O60741 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCN1O60741 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HCN1O60741 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HCN1O60741 AC016405.3-201ENST00000607710 860 ntBASIC18.84■□□□□ 0.61
HCN1O60741 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.84■□□□□ 0.61
HCN1O60741 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.84■□□□□ 0.61
HCN1O60741 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.84■□□□□ 0.61
HCN1O60741 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.84■□□□□ 0.61
HCN1O60741 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HCN1O60741 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCN1O60741 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HCN1O60741 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCN1O60741 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HCN1O60741 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HCN1O60741 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HCN1O60741 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HCN1O60741 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.83■□□□□ 0.61
HCN1O60741 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.83■□□□□ 0.6
HCN1O60741 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.83■□□□□ 0.6
HCN1O60741 RARRES2P4-201ENST00000514074 484 ntBASIC18.83■□□□□ 0.6
HCN1O60741 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.83■□□□□ 0.6
HCN1O60741 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.83■□□□□ 0.6
HCN1O60741 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN1O60741 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HCN1O60741 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
HCN1O60741 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN1O60741 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HCN1O60741 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN1O60741 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN1O60741 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
HCN1O60741 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN1O60741 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN1O60741 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
HCN1O60741 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCN1O60741 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.83■□□□□ 0.6
HCN1O60741 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HCN1O60741 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.82■□□□□ 0.6
HCN1O60741 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN1O60741 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN1O60741 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN1O60741 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN1O60741 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN1O60741 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN1O60741 MIPEPP3-201ENST00000412105 444 ntBASIC18.82■□□□□ 0.6
HCN1O60741 CD99P1-205ENST00000527459 561 ntBASIC18.82■□□□□ 0.6
HCN1O60741 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HCN1O60741 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN1O60741 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.82■□□□□ 0.6
HCN1O60741 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN1O60741 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HCN1O60741 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.82■□□□□ 0.6
HCN1O60741 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN1O60741 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN1O60741 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN1O60741 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN1O60741 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HCN1O60741 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN1O60741 AP005212.1-201ENST00000581547 1997 ntBASIC18.81■□□□□ 0.6
HCN1O60741 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN1O60741 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HCN1O60741 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.81■□□□□ 0.6
HCN1O60741 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN1O60741 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HCN1O60741 AC093787.1-201ENST00000450396 207 ntBASIC18.81■□□□□ 0.6
HCN1O60741 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.81■□□□□ 0.6
HCN1O60741 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.81■□□□□ 0.6
HCN1O60741 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.81■□□□□ 0.6
HCN1O60741 KRT18P6-201ENST00000555540 1265 ntBASIC18.81■□□□□ 0.6
HCN1O60741 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.81■□□□□ 0.6
HCN1O60741 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.81■□□□□ 0.6
HCN1O60741 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.81■□□□□ 0.6
HCN1O60741 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HCN1O60741 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HCN1O60741 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.81■□□□□ 0.6
HCN1O60741 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.81■□□□□ 0.6
HCN1O60741 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HCN1O60741 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HCN1O60741 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HCN1O60741 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HCN1O60741 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.8■□□□□ 0.6
HCN1O60741 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HCN1O60741 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HCN1O60741 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HCN1O60741 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HCN1O60741 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HCN1O60741 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HCN1O60741 CDV3P1-201ENST00000471403 739 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms