Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
GMDSO60547 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GMDSO60547 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GMDSO60547 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.83■□□□□ 0.44
GMDSO60547 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
GMDSO60547 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.83■□□□□ 0.44
GMDSO60547 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
GMDSO60547 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.83■□□□□ 0.44
GMDSO60547 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GMDSO60547 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GMDSO60547 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GMDSO60547 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GMDSO60547 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.82■□□□□ 0.44
GMDSO60547 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.82■□□□□ 0.44
GMDSO60547 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.82■□□□□ 0.44
GMDSO60547 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
GMDSO60547 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.82■□□□□ 0.44
GMDSO60547 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.82■□□□□ 0.44
GMDSO60547 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
GMDSO60547 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.82■□□□□ 0.44
GMDSO60547 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
GMDSO60547 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
GMDSO60547 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GMDSO60547 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.81■□□□□ 0.44
GMDSO60547 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GMDSO60547 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GMDSO60547 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GMDSO60547 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.81■□□□□ 0.44
GMDSO60547 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.81■□□□□ 0.44
GMDSO60547 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.81■□□□□ 0.44
GMDSO60547 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GMDSO60547 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GMDSO60547 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.81■□□□□ 0.44
GMDSO60547 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GMDSO60547 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GMDSO60547 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.81■□□□□ 0.44
GMDSO60547 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
GMDSO60547 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GMDSO60547 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.81■□□□□ 0.44
GMDSO60547 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.81■□□□□ 0.44
GMDSO60547 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GMDSO60547 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.81■□□□□ 0.44
GMDSO60547 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.81■□□□□ 0.44
GMDSO60547 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.8■□□□□ 0.44
GMDSO60547 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.8■□□□□ 0.44
GMDSO60547 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 AC026471.1-201ENST00000564629 3026 ntBASIC17.8■□□□□ 0.44
GMDSO60547 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.8■□□□□ 0.44
GMDSO60547 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GMDSO60547 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
GMDSO60547 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
GMDSO60547 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
GMDSO60547 KRT18P5-201ENST00000436075 1291 ntBASIC17.8■□□□□ 0.44
GMDSO60547 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.8■□□□□ 0.44
GMDSO60547 SLC7A5P1-201ENST00000568957 537 ntBASIC17.8■□□□□ 0.44
GMDSO60547 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
GMDSO60547 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.8■□□□□ 0.44
GMDSO60547 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.8■□□□□ 0.44
GMDSO60547 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GMDSO60547 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
GMDSO60547 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GMDSO60547 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.79■□□□□ 0.44
GMDSO60547 AC011484.1-201ENST00000377652 1995 ntBASIC17.79■□□□□ 0.44
GMDSO60547 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GMDSO60547 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GMDSO60547 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.79■□□□□ 0.44
GMDSO60547 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.79■□□□□ 0.44
GMDSO60547 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.79■□□□□ 0.44
GMDSO60547 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.79■□□□□ 0.44
GMDSO60547 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.79■□□□□ 0.44
GMDSO60547 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GMDSO60547 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.79■□□□□ 0.44
GMDSO60547 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms