Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH17O14917 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH17O14917 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PCDH17O14917 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH17O14917 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.27■□□□□ 0.68
PCDH17O14917 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.27■□□□□ 0.68
PCDH17O14917 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH17O14917 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH17O14917 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH17O14917 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH17O14917 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH17O14917 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH17O14917 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH17O14917 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDH17O14917 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
PCDH17O14917 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PCDH17O14917 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PCDH17O14917 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
PCDH17O14917 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDH17O14917 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
PCDH17O14917 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PCDH17O14917 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH17O14917 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH17O14917 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH17O14917 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 KRT18P68-201ENST00000392293 1000 ntBASIC19.26■□□□□ 0.67
PCDH17O14917 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.26■□□□□ 0.67
PCDH17O14917 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDH17O14917 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDH17O14917 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PCDH17O14917 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDH17O14917 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDH17O14917 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDH17O14917 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCDH17O14917 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDH17O14917 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH17O14917 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH17O14917 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH17O14917 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH17O14917 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH17O14917 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH17O14917 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH17O14917 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH17O14917 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PCDH17O14917 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH17O14917 DUSP5P2-201ENST00000426873 1033 ntBASIC19.25■□□□□ 0.67
PCDH17O14917 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH17O14917 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDH17O14917 AC098934.4-201ENST00000564127 592 ntBASIC19.25■□□□□ 0.67
PCDH17O14917 MIR4651-201ENST00000582622 73 ntBASIC19.25■□□□□ 0.67
PCDH17O14917 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PCDH17O14917 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH17O14917 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDH17O14917 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
PCDH17O14917 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH17O14917 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH17O14917 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH17O14917 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
PCDH17O14917 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDH17O14917 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH17O14917 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDH17O14917 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH17O14917 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDH17O14917 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH17O14917 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH17O14917 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDH17O14917 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH17O14917 FAM201B-201ENST00000458407 597 ntBASIC19.24■□□□□ 0.67
PCDH17O14917 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH17O14917 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDH17O14917 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH17O14917 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDH17O14917 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH17O14917 AL391422.3-201ENST00000603791 2761 ntBASIC19.24■□□□□ 0.67
PCDH17O14917 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH17O14917 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH17O14917 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH17O14917 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH17O14917 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH17O14917 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH17O14917 CYP21A1P-202ENST00000354927 1481 ntBASIC19.23■□□□□ 0.67
PCDH17O14917 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH17O14917 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH17O14917 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
PCDH17O14917 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH17O14917 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDH17O14917 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDH17O14917 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDH17O14917 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms