Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 MIR6722-201ENST00000617286 78 ntBASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 GPX1-201ENST00000419349 1106 ntBASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 Z82202.1-201ENST00000623446 1880 ntBASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 AC139795.1-202ENST00000500444 432 ntBASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM256-PLSCR3K7ERE1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms