Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC188H7C350 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC188H7C350 AC091305.1-201ENST00000479476 895 ntBASIC21.01■□□□□ 0.95
CCDC188H7C350 AL355001.2-201ENST00000620617 1191 ntBASIC21.01■□□□□ 0.95
CCDC188H7C350 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC188H7C350 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC188H7C350 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC188H7C350 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC188H7C350 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC188H7C350 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC188H7C350 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC188H7C350 AP000974.1-201ENST00000623909 2387 ntBASIC21.01■□□□□ 0.95
CCDC188H7C350 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC188H7C350 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC188H7C350 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC188H7C350 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC188H7C350 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC188H7C350 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CCDC188H7C350 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC188H7C350 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC188H7C350 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC188H7C350 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21■□□□□ 0.95
CCDC188H7C350 AL358852.1-201ENST00000623174 1268 ntBASIC21■□□□□ 0.95
CCDC188H7C350 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC188H7C350 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC188H7C350 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC188H7C350 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC188H7C350 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC188H7C350 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC188H7C350 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC188H7C350 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC188H7C350 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC188H7C350 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC188H7C350 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC188H7C350 TREX1-205ENST00000625293 1783 ntBASIC20.99■□□□□ 0.95
CCDC188H7C350 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC188H7C350 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC188H7C350 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC188H7C350 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
CCDC188H7C350 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC188H7C350 TNXA-203ENST00000507684 2038 ntBASIC20.99■□□□□ 0.95
CCDC188H7C350 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC188H7C350 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC188H7C350 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC188H7C350 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC188H7C350 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC188H7C350 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC188H7C350 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC188H7C350 AC096631.2-201ENST00000436136 790 ntBASIC20.98■□□□□ 0.95
CCDC188H7C350 AF213884.3-201ENST00000563833 479 ntBASIC20.98■□□□□ 0.95
CCDC188H7C350 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC188H7C350 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC188H7C350 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC188H7C350 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC188H7C350 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC188H7C350 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC188H7C350 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CCDC188H7C350 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC188H7C350 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC188H7C350 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC188H7C350 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC188H7C350 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCDC188H7C350 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC188H7C350 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC188H7C350 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC188H7C350 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC188H7C350 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC188H7C350 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC188H7C350 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC188H7C350 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC188H7C350 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC188H7C350 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC188H7C350 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC188H7C350 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC188H7C350 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC188H7C350 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC188H7C350 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC188H7C350 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC188H7C350 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC188H7C350 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.96■□□□□ 0.95
CCDC188H7C350 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC188H7C350 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCDC188H7C350 AC093484.2-201ENST00000580996 2166 ntBASIC20.96■□□□□ 0.95
CCDC188H7C350 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC188H7C350 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC188H7C350 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC188H7C350 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC188H7C350 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC188H7C350 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC188H7C350 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC188H7C350 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC188H7C350 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC188H7C350 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC188H7C350 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC188H7C350 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CCDC188H7C350 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC188H7C350 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC188H7C350 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC188H7C350 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC188H7C350 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms