Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 KRT16P5-201ENST00000455284 522 ntBASIC16.83■□□□□ 0.28
RNF223E7ERA6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF223E7ERA6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF223E7ERA6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RNF223E7ERA6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF223E7ERA6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF223E7ERA6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF223E7ERA6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF223E7ERA6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF223E7ERA6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF223E7ERA6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF223E7ERA6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 NBPF21P-201ENST00000425093 1451 ntBASIC16.82■□□□□ 0.28
RNF223E7ERA6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF223E7ERA6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF223E7ERA6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF223E7ERA6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 AL353807.1-201ENST00000427475 662 ntBASIC16.82■□□□□ 0.28
RNF223E7ERA6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF223E7ERA6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF223E7ERA6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF223E7ERA6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 AL049597.2-201ENST00000565575 961 ntBASIC16.82■□□□□ 0.28
RNF223E7ERA6 MIR6786-201ENST00000616843 113 ntBASIC16.82■□□□□ 0.28
RNF223E7ERA6 AL121829.2-201ENST00000620908 328 ntBASIC16.82■□□□□ 0.28
RNF223E7ERA6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF223E7ERA6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF223E7ERA6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF223E7ERA6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF223E7ERA6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF223E7ERA6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF223E7ERA6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RNF223E7ERA6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF223E7ERA6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 AC124283.5-201ENST00000624661 1809 ntBASIC16.81■□□□□ 0.28
RNF223E7ERA6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF223E7ERA6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF223E7ERA6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF223E7ERA6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF223E7ERA6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF223E7ERA6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF223E7ERA6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF223E7ERA6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF223E7ERA6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF223E7ERA6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RNF223E7ERA6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF223E7ERA6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RNF223E7ERA6 MTATP6P19-201ENST00000413797 659 ntBASIC16.8■□□□□ 0.28
RNF223E7ERA6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RNF223E7ERA6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RNF223E7ERA6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF223E7ERA6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF223E7ERA6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF223E7ERA6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF223E7ERA6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF223E7ERA6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF223E7ERA6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF223E7ERA6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF223E7ERA6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF223E7ERA6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF223E7ERA6 AC005363.2-201ENST00000618631 242 ntBASIC16.79■□□□□ 0.28
RNF223E7ERA6 AL590326.2-201ENST00000625139 305 ntBASIC16.79■□□□□ 0.28
RNF223E7ERA6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF223E7ERA6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF223E7ERA6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF223E7ERA6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms