Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 PRKY-204ENST00000533551 1019 ntBASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TBC1D3BA6NDS4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3BA6NDS4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3BA6NDS4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3BA6NDS4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3BA6NDS4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.59■□□□□ 0.89
TBC1D3BA6NDS4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3BA6NDS4 RPS2P55-201ENST00000397318 883 ntBASIC20.59■□□□□ 0.89
TBC1D3BA6NDS4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.59■□□□□ 0.89
TBC1D3BA6NDS4 AC107956.1-201ENST00000494359 873 ntBASIC20.59■□□□□ 0.89
TBC1D3BA6NDS4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3BA6NDS4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3BA6NDS4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3BA6NDS4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 AC012618.2-201ENST00000428058 849 ntBASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 AC233702.5-201ENST00000584107 538 ntBASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.58■□□□□ 0.89
TBC1D3BA6NDS4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TBC1D3BA6NDS4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TBC1D3BA6NDS4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.58■□□□□ 0.88
TBC1D3BA6NDS4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TBC1D3BA6NDS4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TBC1D3BA6NDS4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TBC1D3BA6NDS4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.58■□□□□ 0.88
TBC1D3BA6NDS4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 AC079834.2-201ENST00000609776 1949 ntBASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 AC023632.3-201ENST00000521633 145 ntBASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 AP001412.1-201ENST00000608405 714 ntBASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TBC1D3BA6NDS4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 AL135905.2-201ENST00000584934 1404 ntBASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3BA6NDS4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 6.6 ms