Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MEIS3P1A6NDR6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.3■□□□□ 0.36
MEIS3P1A6NDR6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MEIS3P1A6NDR6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MEIS3P1A6NDR6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MEIS3P1A6NDR6 AP004607.4-201ENST00000530158 1459 ntBASIC17.3■□□□□ 0.36
MEIS3P1A6NDR6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.3■□□□□ 0.36
MEIS3P1A6NDR6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MEIS3P1A6NDR6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 GUSBP5-201ENST00000418136 578 ntBASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MEIS3P1A6NDR6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 AC126544.1-201ENST00000580842 1059 ntBASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
MEIS3P1A6NDR6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 AL035685.1-201ENST00000636663 812 ntBASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
MEIS3P1A6NDR6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MEIS3P1A6NDR6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.27■□□□□ 0.35
MEIS3P1A6NDR6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
MEIS3P1A6NDR6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MEIS3P1A6NDR6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MEIS3P1A6NDR6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MEIS3P1A6NDR6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms