Protein–RNA interactions for Protein: A0A0J9YX20

TRBV7-6, T-cell receptor beta variable 7-6 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-6A0A0J9YX20 SERBP1P1-201ENST00000396021 1160 ntBASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 AC133561.4-201ENST00000566112 224 ntBASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 MIR2861-201ENST00000636310 90 ntBASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV7-6A0A0J9YX20 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 AP000974.1-201ENST00000623909 2387 ntBASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 AC005224.4-201ENST00000583262 1652 ntBASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 CREM-229ENST00000474362 1030 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV7-6A0A0J9YX20 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 PXK-203ENST00000383715 1756 ntTSL 5 BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV7-6A0A0J9YX20 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 EEF1DP3-203ENST00000566025 782 ntBASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV7-6A0A0J9YX20 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms