Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 TCF3P1-201ENST00000423021 1937 ntBASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 AC026471.6-201ENST00000622954 1905 ntBASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.94□□□□□ -0.18
SPCS1Q9Y6A9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 MIR6090-201ENST00000622481 60 ntBASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 AP004607.7-201ENST00000527152 1677 ntBASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS1Q9Y6A9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS1Q9Y6A9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 NOC2LP2-201ENST00000407594 1944 ntBASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS1Q9Y6A9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms