Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
R3HCC1Q9Y3T6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC23.05■■□□□ 1.28
R3HCC1Q9Y3T6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
R3HCC1Q9Y3T6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
R3HCC1Q9Y3T6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
R3HCC1Q9Y3T6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
R3HCC1Q9Y3T6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
R3HCC1Q9Y3T6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
R3HCC1Q9Y3T6 TNXA-203ENST00000507684 2038 ntBASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 AC026471.6-201ENST00000622954 1905 ntBASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 AP006587.3-201ENST00000525742 1516 ntBASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
R3HCC1Q9Y3T6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 DUX4L2-201ENST00000561772 1275 ntBASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 DUX4L6-201ENST00000626483 1275 ntBASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 DUX4L1-201ENST00000627662 1275 ntBASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 DUX4L8-201ENST00000629013 1275 ntBASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 DUX4L3-201ENST00000630187 1275 ntBASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 DUX4L7-201ENST00000630678 1275 ntBASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 DUX4L5-201ENST00000630834 1275 ntBASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
R3HCC1Q9Y3T6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
R3HCC1Q9Y3T6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.27
R3HCC1Q9Y3T6 AC055733.4-201ENST00000638462 1354 ntBASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3HCC1Q9Y3T6 NEFHP1-201ENST00000412845 2629 ntBASIC23■■□□□ 1.27
R3HCC1Q9Y3T6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23■■□□□ 1.27
R3HCC1Q9Y3T6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23■■□□□ 1.27
R3HCC1Q9Y3T6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
R3HCC1Q9Y3T6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23■■□□□ 1.27
R3HCC1Q9Y3T6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23■■□□□ 1.27
R3HCC1Q9Y3T6 GXYLT1P2-201ENST00000433312 1230 ntBASIC23■■□□□ 1.27
R3HCC1Q9Y3T6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms