Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 AL031963.3-201ENST00000606441 850 ntBASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 AC004264.1-201ENST00000608354 794 ntBASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 AL121906.2-201ENST00000621597 723 ntBASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTCBQ9Y3I0 LINC01568-207ENST00000641790 1380 ntBASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 AP002982.1-201ENST00000492365 877 ntBASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTCBQ9Y3I0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 AC113347.1-201ENST00000413321 391 ntBASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.71■■□□□ 1.71
RTCBQ9Y3I0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RTCBQ9Y3I0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RTCBQ9Y3I0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.71
RTCBQ9Y3I0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
RTCBQ9Y3I0 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.7■■□□□ 1.7
RTCBQ9Y3I0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
RTCBQ9Y3I0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RTCBQ9Y3I0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.7■■□□□ 1.7
RTCBQ9Y3I0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
RTCBQ9Y3I0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RTCBQ9Y3I0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RTCBQ9Y3I0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 KRT18P57-201ENST00000443599 1254 ntBASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTCBQ9Y3I0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
RTCBQ9Y3I0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTCBQ9Y3I0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.68■■□□□ 1.7
RTCBQ9Y3I0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.68■■□□□ 1.7
RTCBQ9Y3I0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC25.68■■□□□ 1.7
RTCBQ9Y3I0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTCBQ9Y3I0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RTCBQ9Y3I0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTCBQ9Y3I0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.68■■□□□ 1.7
RTCBQ9Y3I0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTCBQ9Y3I0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTCBQ9Y3I0 AC011484.1-201ENST00000377652 1995 ntBASIC25.67■■□□□ 1.7
RTCBQ9Y3I0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTCBQ9Y3I0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.67■■□□□ 1.7
RTCBQ9Y3I0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.67■■□□□ 1.7
RTCBQ9Y3I0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTCBQ9Y3I0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.67■■□□□ 1.7
RTCBQ9Y3I0 NAPSB-206ENST00000562112 1266 ntBASIC25.67■■□□□ 1.7
RTCBQ9Y3I0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RTCBQ9Y3I0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.67■■□□□ 1.7
RTCBQ9Y3I0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.67■■□□□ 1.7
RTCBQ9Y3I0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTCBQ9Y3I0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.66■■□□□ 1.7
RTCBQ9Y3I0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RTCBQ9Y3I0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RTCBQ9Y3I0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RTCBQ9Y3I0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RTCBQ9Y3I0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RTCBQ9Y3I0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.66■■□□□ 1.7
RTCBQ9Y3I0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.66■■□□□ 1.7
RTCBQ9Y3I0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms