Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 AC098590.1-201ENST00000468126 897 ntBASIC23.25■■□□□ 1.31
DDX41Q9UJV9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 HLA-B-256ENST00000639848 1089 ntBASIC23.25■■□□□ 1.31
DDX41Q9UJV9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX41Q9UJV9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.24■■□□□ 1.31
DDX41Q9UJV9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX41Q9UJV9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX41Q9UJV9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
DDX41Q9UJV9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX41Q9UJV9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
DDX41Q9UJV9 AC128676.1-201ENST00000454392 318 ntBASIC23.24■■□□□ 1.31
DDX41Q9UJV9 AC060766.5-201ENST00000590539 871 ntBASIC23.24■■□□□ 1.31
DDX41Q9UJV9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.24■■□□□ 1.31
DDX41Q9UJV9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.24■■□□□ 1.31
DDX41Q9UJV9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX41Q9UJV9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX41Q9UJV9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX41Q9UJV9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 RPS2P52-201ENST00000469610 820 ntBASIC23.23■■□□□ 1.31
DDX41Q9UJV9 AP003097.1-201ENST00000530657 1135 ntBASIC23.23■■□□□ 1.31
DDX41Q9UJV9 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX41Q9UJV9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 AC008403.3-201ENST00000598924 454 ntBASIC23.22■■□□□ 1.31
DDX41Q9UJV9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX41Q9UJV9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX41Q9UJV9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX41Q9UJV9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.2■■□□□ 1.3
DDX41Q9UJV9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX41Q9UJV9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.2■■□□□ 1.3
DDX41Q9UJV9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX41Q9UJV9 GCSHP5-201ENST00000443090 522 ntBASIC23.2■■□□□ 1.3
DDX41Q9UJV9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms