Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TREM2Q9NZC2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TREM2Q9NZC2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TREM2Q9NZC2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 AC116050.2-201ENST00000612102 1779 ntBASIC17.44■□□□□ 0.38
TREM2Q9NZC2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 MIPEPP3-201ENST00000412105 444 ntBASIC17.44■□□□□ 0.38
TREM2Q9NZC2 BX276092.2-201ENST00000417668 665 ntBASIC17.44■□□□□ 0.38
TREM2Q9NZC2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 AC121338.2-201ENST00000622535 1744 ntBASIC17.44■□□□□ 0.38
TREM2Q9NZC2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.44■□□□□ 0.38
TREM2Q9NZC2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 FEM1AP1-201ENST00000431297 1995 ntBASIC17.43■□□□□ 0.38
TREM2Q9NZC2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 TSPY20P-201ENST00000450910 630 ntBASIC17.43■□□□□ 0.38
TREM2Q9NZC2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TREM2Q9NZC2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 PLK5-205ENST00000642079 1969 ntBASIC17.42■□□□□ 0.38
TREM2Q9NZC2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.42■□□□□ 0.38
TREM2Q9NZC2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 AC010980.2-201ENST00000587099 1412 ntBASIC17.42■□□□□ 0.38
TREM2Q9NZC2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TREM2Q9NZC2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TREM2Q9NZC2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TREM2Q9NZC2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TREM2Q9NZC2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
TREM2Q9NZC2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TREM2Q9NZC2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TREM2Q9NZC2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms