Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.08■□□□□ 0.65
CHD8Q9HCK8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHD8Q9HCK8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHD8Q9HCK8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHD8Q9HCK8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHD8Q9HCK8 HMGA1P5-201ENST00000412453 271 ntBASIC19.08■□□□□ 0.64
CHD8Q9HCK8 AL138966.2-201ENST00000621997 464 ntBASIC19.08■□□□□ 0.64
CHD8Q9HCK8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.08■□□□□ 0.64
CHD8Q9HCK8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHD8Q9HCK8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 AC092053.2-201ENST00000640557 1818 ntBASIC19.07■□□□□ 0.64
CHD8Q9HCK8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 PGM5P4-201ENST00000421970 445 ntBASIC19.07■□□□□ 0.64
CHD8Q9HCK8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHD8Q9HCK8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.06■□□□□ 0.64
CHD8Q9HCK8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 AL031985.4-201ENST00000642138 673 ntBASIC19.06■□□□□ 0.64
CHD8Q9HCK8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.06■□□□□ 0.64
CHD8Q9HCK8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHD8Q9HCK8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 AL845331.1-201ENST00000424978 1190 ntBASIC19.05■□□□□ 0.64
CHD8Q9HCK8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHD8Q9HCK8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 AL359075.1-203ENST00000462729 1002 ntBASIC19.04■□□□□ 0.64
CHD8Q9HCK8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD8Q9HCK8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 CR392000.1-201ENST00000624770 1228 ntBASIC19.03■□□□□ 0.64
CHD8Q9HCK8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.03■□□□□ 0.64
CHD8Q9HCK8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHD8Q9HCK8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms