Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.4■□□□□ 0.7
BRF2Q9HAW0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRF2Q9HAW0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
BRF2Q9HAW0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
BRF2Q9HAW0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
BRF2Q9HAW0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRF2Q9HAW0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.4■□□□□ 0.7
BRF2Q9HAW0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BRF2Q9HAW0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BRF2Q9HAW0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BRF2Q9HAW0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BRF2Q9HAW0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 MCRIP2P1-201ENST00000394346 511 ntBASIC19.39■□□□□ 0.69
BRF2Q9HAW0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 AC231657.2-201ENST00000624556 255 ntBASIC19.39■□□□□ 0.69
BRF2Q9HAW0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRF2Q9HAW0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.38■□□□□ 0.69
BRF2Q9HAW0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 TCF3P1-201ENST00000423021 1937 ntBASIC19.37■□□□□ 0.69
BRF2Q9HAW0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRF2Q9HAW0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 AC069236.1-201ENST00000604339 616 ntBASIC19.36■□□□□ 0.69
BRF2Q9HAW0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRF2Q9HAW0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms