Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CYSTM1Q9H1C7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC11.87□□□□□ -0.51
CYSTM1Q9H1C7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CYSTM1Q9H1C7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CYSTM1Q9H1C7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CYSTM1Q9H1C7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CYSTM1Q9H1C7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 DYNLL1-208ENST00000550178 581 ntBASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 BICD1-207ENST00000551848 1962 ntBASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CYSTM1Q9H1C7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 AL359504.2-201ENST00000605506 1601 ntBASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC11.85□□□□□ -0.51
CYSTM1Q9H1C7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 AC110285.7-201ENST00000624417 1536 ntBASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 AC022211.2-201ENST00000585075 2527 ntBASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CYSTM1Q9H1C7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC11.83□□□□□ -0.51
CYSTM1Q9H1C7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms