Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH11XQ9BZA7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH11XQ9BZA7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH11XQ9BZA7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH11XQ9BZA7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.5■■□□□ 1.83
PCDH11XQ9BZA7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
PCDH11XQ9BZA7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC26.5■■□□□ 1.83
PCDH11XQ9BZA7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC26.5■■□□□ 1.83
PCDH11XQ9BZA7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC26.5■■□□□ 1.83
PCDH11XQ9BZA7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC26.5■■□□□ 1.83
PCDH11XQ9BZA7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.5■■□□□ 1.83
PCDH11XQ9BZA7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH11XQ9BZA7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.49■■□□□ 1.83
PCDH11XQ9BZA7 ECEL1P1-201ENST00000373592 1742 ntBASIC26.49■■□□□ 1.83
PCDH11XQ9BZA7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDH11XQ9BZA7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC26.49■■□□□ 1.83
PCDH11XQ9BZA7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDH11XQ9BZA7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
PCDH11XQ9BZA7 AL355355.2-201ENST00000442321 338 ntBASIC26.49■■□□□ 1.83
PCDH11XQ9BZA7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC26.49■■□□□ 1.83
PCDH11XQ9BZA7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PCDH11XQ9BZA7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH11XQ9BZA7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 MIR2861-201ENST00000636310 90 ntBASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH11XQ9BZA7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC26.46■■□□□ 1.83
PCDH11XQ9BZA7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.46■■□□□ 1.83
PCDH11XQ9BZA7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDH11XQ9BZA7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.46■■□□□ 1.83
PCDH11XQ9BZA7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
PCDH11XQ9BZA7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
PCDH11XQ9BZA7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.46■■□□□ 1.83
PCDH11XQ9BZA7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
PCDH11XQ9BZA7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDH11XQ9BZA7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDH11XQ9BZA7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDH11XQ9BZA7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDH11XQ9BZA7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PCDH11XQ9BZA7 MMP23A-201ENST00000234610 1017 ntBASIC26.45■■□□□ 1.83
PCDH11XQ9BZA7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PCDH11XQ9BZA7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC26.45■■□□□ 1.83
PCDH11XQ9BZA7 FAM197Y1-201ENST00000421178 764 ntBASIC26.45■■□□□ 1.83
PCDH11XQ9BZA7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
PCDH11XQ9BZA7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC26.45■■□□□ 1.83
PCDH11XQ9BZA7 F2R-202ENST00000505600 442 ntTSL 2 BASIC26.45■■□□□ 1.83
PCDH11XQ9BZA7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PCDH11XQ9BZA7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC26.45■■□□□ 1.83
PCDH11XQ9BZA7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC26.45■■□□□ 1.83
PCDH11XQ9BZA7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PCDH11XQ9BZA7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC26.45■■□□□ 1.82
PCDH11XQ9BZA7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDH11XQ9BZA7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PCDH11XQ9BZA7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC26.45■■□□□ 1.82
PCDH11XQ9BZA7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDH11XQ9BZA7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC26.45■■□□□ 1.82
PCDH11XQ9BZA7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDH11XQ9BZA7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.44■■□□□ 1.82
PCDH11XQ9BZA7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC26.44■■□□□ 1.82
PCDH11XQ9BZA7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC26.44■■□□□ 1.82
PCDH11XQ9BZA7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDH11XQ9BZA7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDH11XQ9BZA7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
PCDH11XQ9BZA7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDH11XQ9BZA7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
PCDH11XQ9BZA7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDH11XQ9BZA7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDH11XQ9BZA7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
PCDH11XQ9BZA7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDH11XQ9BZA7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC26.43■■□□□ 1.82
PCDH11XQ9BZA7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDH11XQ9BZA7 AC073195.1-201ENST00000607241 877 ntBASIC26.43■■□□□ 1.82
PCDH11XQ9BZA7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDH11XQ9BZA7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC26.43■■□□□ 1.82
PCDH11XQ9BZA7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms