Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS1Q92902 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS1Q92902 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPS1Q92902 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPS1Q92902 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS1Q92902 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
HPS1Q92902 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HPS1Q92902 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS1Q92902 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS1Q92902 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS1Q92902 CCDC92B-201ENST00000575506 885 ntBASIC18.38■□□□□ 0.53
HPS1Q92902 RARRES2P11-201ENST00000635158 484 ntBASIC18.38■□□□□ 0.53
HPS1Q92902 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.38■□□□□ 0.53
HPS1Q92902 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS1Q92902 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS1Q92902 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
HPS1Q92902 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.38■□□□□ 0.53
HPS1Q92902 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS1Q92902 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS1Q92902 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.37■□□□□ 0.53
HPS1Q92902 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HPS1Q92902 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.37■□□□□ 0.53
HPS1Q92902 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.37■□□□□ 0.53
HPS1Q92902 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HPS1Q92902 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HPS1Q92902 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.37■□□□□ 0.53
HPS1Q92902 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
HPS1Q92902 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.37■□□□□ 0.53
HPS1Q92902 TERF1P2-201ENST00000583350 1212 ntBASIC18.37■□□□□ 0.53
HPS1Q92902 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HPS1Q92902 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.37■□□□□ 0.53
HPS1Q92902 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.37■□□□□ 0.53
HPS1Q92902 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HPS1Q92902 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HPS1Q92902 OXCT2P1-201ENST00000447263 1535 ntBASIC18.37■□□□□ 0.53
HPS1Q92902 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.37■□□□□ 0.53
HPS1Q92902 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.37■□□□□ 0.53
HPS1Q92902 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HPS1Q92902 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
HPS1Q92902 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS1Q92902 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS1Q92902 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS1Q92902 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
HPS1Q92902 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS1Q92902 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS1Q92902 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.36■□□□□ 0.53
HPS1Q92902 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS1Q92902 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.36■□□□□ 0.53
HPS1Q92902 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.36■□□□□ 0.53
HPS1Q92902 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.36■□□□□ 0.53
HPS1Q92902 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HPS1Q92902 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS1Q92902 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS1Q92902 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS1Q92902 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.36■□□□□ 0.53
HPS1Q92902 KRT18P14-201ENST00000534205 1250 ntBASIC18.36■□□□□ 0.53
HPS1Q92902 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS1Q92902 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HPS1Q92902 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS1Q92902 AC105233.4-201ENST00000642045 216 ntBASIC18.36■□□□□ 0.53
HPS1Q92902 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
HPS1Q92902 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS1Q92902 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS1Q92902 AC112907.3-201ENST00000577781 2400 ntBASIC18.35■□□□□ 0.53
HPS1Q92902 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.35■□□□□ 0.53
HPS1Q92902 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.35■□□□□ 0.53
HPS1Q92902 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HPS1Q92902 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.35■□□□□ 0.53
HPS1Q92902 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms