Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 OR2I1P-207ENST00000453522 948 ntBASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 CD72-202ENST00000378430 585 ntTSL 3 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 HES6-204ENST00000409182 863 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 AC103724.3-201ENST00000564481 992 ntBASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM11BQ8TCY0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
SMIM11BQ8TCY0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SMIM11BQ8TCY0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
SMIM11BQ8TCY0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 BX005040.4-201ENST00000637145 1518 ntBASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms