Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.83□□□□□ -0.36
SVIPQ8NHG7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.82□□□□□ -0.36
SVIPQ8NHG7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 AC092384.3-202ENST00000564646 2873 ntBASIC12.82□□□□□ -0.36
SVIPQ8NHG7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 HR-201ENST00000312841 5351 ntTSL 5 BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SVIPQ8NHG7 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 PIGN-226ENST00000638591 2776 ntTSL 5 BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 HTR7P1-202ENST00000624664 4411 ntBASIC12.81□□□□□ -0.36
SVIPQ8NHG7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 AOC4P-203ENST00000566825 2289 ntBASIC12.81□□□□□ -0.36
SVIPQ8NHG7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SVIPQ8NHG7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 CICP13-201ENST00000422015 2789 ntBASIC12.8□□□□□ -0.36
SVIPQ8NHG7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 REXO1L9P-201ENST00000604264 2108 ntBASIC12.8□□□□□ -0.36
SVIPQ8NHG7 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 AC138932.3-201ENST00000567634 1902 ntBASIC12.8□□□□□ -0.36
SVIPQ8NHG7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SVIPQ8NHG7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SVIPQ8NHG7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms