Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
ZNF248Q8NDW4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF248Q8NDW4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF248Q8NDW4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF248Q8NDW4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 TMPOP1-202ENST00000424642 1267 ntBASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 TSPY15P-201ENST00000457163 923 ntBASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 AL355075.4-201ENST00000554988 638 ntBASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
ZNF248Q8NDW4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 KRASP1-201ENST00000407852 552 ntBASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 C2orf69P4-201ENST00000565394 541 ntBASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 AC120498.8-201ENST00000614275 531 ntBASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF248Q8NDW4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ZNF248Q8NDW4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms