Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC00311Q8N616 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.46■□□□□ 0.22
LINC00311Q8N616 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
LINC00311Q8N616 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LINC00311Q8N616 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00311Q8N616 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00311Q8N616 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00311Q8N616 CROCCP5-201ENST00000436658 830 ntBASIC16.45■□□□□ 0.22
LINC00311Q8N616 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 AC105036.2-201ENST00000569468 176 ntBASIC16.45■□□□□ 0.22
LINC00311Q8N616 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00311Q8N616 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00311Q8N616 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00311Q8N616 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00311Q8N616 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00311Q8N616 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00311Q8N616 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00311Q8N616 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00311Q8N616 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
LINC00311Q8N616 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LINC00311Q8N616 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00311Q8N616 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LINC00311Q8N616 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.44■□□□□ 0.22
LINC00311Q8N616 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC00311Q8N616 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00311Q8N616 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.44■□□□□ 0.22
LINC00311Q8N616 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00311Q8N616 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC00311Q8N616 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00311Q8N616 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00311Q8N616 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00311Q8N616 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00311Q8N616 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00311Q8N616 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 AL121832.2-201ENST00000610979 668 ntBASIC16.43■□□□□ 0.22
LINC00311Q8N616 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00311Q8N616 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00311Q8N616 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00311Q8N616 MKRN4P-201ENST00000444706 1521 ntBASIC16.43■□□□□ 0.22
LINC00311Q8N616 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00311Q8N616 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00311Q8N616 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00311Q8N616 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.43■□□□□ 0.22
LINC00311Q8N616 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00311Q8N616 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.42■□□□□ 0.22
LINC00311Q8N616 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00311Q8N616 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00311Q8N616 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00311Q8N616 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00311Q8N616 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
LINC00311Q8N616 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00311Q8N616 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00311Q8N616 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LINC00311Q8N616 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00311Q8N616 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.42■□□□□ 0.22
LINC00311Q8N616 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC00311Q8N616 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.42■□□□□ 0.22
LINC00311Q8N616 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00311Q8N616 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00311Q8N616 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC00311Q8N616 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00311Q8N616 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
LINC00311Q8N616 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms