Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.74■□□□□ 0.59
VRK2Q86Y07 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.74■□□□□ 0.59
VRK2Q86Y07 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
VRK2Q86Y07 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK2Q86Y07 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK2Q86Y07 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.74■□□□□ 0.59
VRK2Q86Y07 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK2Q86Y07 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK2Q86Y07 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK2Q86Y07 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK2Q86Y07 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK2Q86Y07 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VRK2Q86Y07 DPP3P2-201ENST00000416030 1696 ntBASIC18.73■□□□□ 0.59
VRK2Q86Y07 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK2Q86Y07 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK2Q86Y07 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VRK2Q86Y07 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK2Q86Y07 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VRK2Q86Y07 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
VRK2Q86Y07 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK2Q86Y07 RARRES2P6-201ENST00000567333 442 ntBASIC18.73■□□□□ 0.59
VRK2Q86Y07 AL591742.1-201ENST00000604433 565 ntBASIC18.73■□□□□ 0.59
VRK2Q86Y07 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK2Q86Y07 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.73■□□□□ 0.59
VRK2Q86Y07 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK2Q86Y07 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK2Q86Y07 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VRK2Q86Y07 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.72■□□□□ 0.59
VRK2Q86Y07 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VRK2Q86Y07 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VRK2Q86Y07 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.72■□□□□ 0.59
VRK2Q86Y07 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
VRK2Q86Y07 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VRK2Q86Y07 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.72■□□□□ 0.59
VRK2Q86Y07 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VRK2Q86Y07 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VRK2Q86Y07 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.72■□□□□ 0.59
VRK2Q86Y07 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.72■□□□□ 0.59
VRK2Q86Y07 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VRK2Q86Y07 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VRK2Q86Y07 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VRK2Q86Y07 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VRK2Q86Y07 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.72■□□□□ 0.59
VRK2Q86Y07 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VRK2Q86Y07 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VRK2Q86Y07 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VRK2Q86Y07 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 KRT18P11-201ENST00000435214 1283 ntBASIC18.71■□□□□ 0.59
VRK2Q86Y07 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 AC016405.3-201ENST00000607710 860 ntBASIC18.71■□□□□ 0.59
VRK2Q86Y07 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VRK2Q86Y07 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
VRK2Q86Y07 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
VRK2Q86Y07 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
VRK2Q86Y07 TCF3P1-201ENST00000423021 1937 ntBASIC18.7■□□□□ 0.58
VRK2Q86Y07 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VRK2Q86Y07 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VRK2Q86Y07 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.7■□□□□ 0.58
VRK2Q86Y07 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VRK2Q86Y07 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VRK2Q86Y07 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
VRK2Q86Y07 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.7■□□□□ 0.58
VRK2Q86Y07 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VRK2Q86Y07 AC016769.1-201ENST00000409132 1010 ntBASIC18.7■□□□□ 0.58
VRK2Q86Y07 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VRK2Q86Y07 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.7■□□□□ 0.58
VRK2Q86Y07 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.7■□□□□ 0.58
VRK2Q86Y07 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.7■□□□□ 0.58
VRK2Q86Y07 MFSD11-216ENST00000590393 1141 ntBASIC18.7■□□□□ 0.58
VRK2Q86Y07 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VRK2Q86Y07 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VRK2Q86Y07 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.7■□□□□ 0.58
VRK2Q86Y07 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VRK2Q86Y07 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VRK2Q86Y07 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.7■□□□□ 0.58
VRK2Q86Y07 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.69■□□□□ 0.58
VRK2Q86Y07 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
VRK2Q86Y07 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VRK2Q86Y07 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VRK2Q86Y07 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.69■□□□□ 0.58
VRK2Q86Y07 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VRK2Q86Y07 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VRK2Q86Y07 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.69■□□□□ 0.58
VRK2Q86Y07 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VRK2Q86Y07 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VRK2Q86Y07 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.69■□□□□ 0.58
VRK2Q86Y07 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.69■□□□□ 0.58
VRK2Q86Y07 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VRK2Q86Y07 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms