Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 AC116562.4-201ENST00000641316 2276 ntBASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 AL020996.1-203ENST00000536896 2307 ntBASIC18.58■□□□□ 0.57
PTCHD4Q6ZW05 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.58■□□□□ 0.57
PTCHD4Q6ZW05 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCHD4Q6ZW05 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCHD4Q6ZW05 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCHD4Q6ZW05 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTCHD4Q6ZW05 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.58■□□□□ 0.57
PTCHD4Q6ZW05 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PTCHD4Q6ZW05 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCHD4Q6ZW05 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCHD4Q6ZW05 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCHD4Q6ZW05 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCHD4Q6ZW05 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCHD4Q6ZW05 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
PTCHD4Q6ZW05 AC005837.3-201ENST00000612163 286 ntBASIC18.58■□□□□ 0.56
PTCHD4Q6ZW05 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTCHD4Q6ZW05 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCHD4Q6ZW05 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTCHD4Q6ZW05 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PTCHD4Q6ZW05 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCHD4Q6ZW05 AP004607.4-201ENST00000530158 1459 ntBASIC18.58■□□□□ 0.56
PTCHD4Q6ZW05 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 AC018445.3-201ENST00000624177 1945 ntBASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCHD4Q6ZW05 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 AC105265.2-201ENST00000467189 838 ntBASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCHD4Q6ZW05 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms