Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
LINC00575Q6W349 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC00575Q6W349 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 AC055733.4-201ENST00000638462 1354 ntBASIC12.82□□□□□ -0.36
LINC00575Q6W349 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC00575Q6W349 LSM4-201ENST00000252816 986 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00575Q6W349 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
LINC00575Q6W349 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 AP005435.1-201ENST00000529293 1178 ntBASIC12.82□□□□□ -0.36
LINC00575Q6W349 AC093503.3-201ENST00000624917 2352 ntBASIC12.82□□□□□ -0.36
LINC00575Q6W349 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC00575Q6W349 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
LINC00575Q6W349 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00575Q6W349 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00575Q6W349 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00575Q6W349 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00575Q6W349 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LINC00575Q6W349 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00575Q6W349 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LINC00575Q6W349 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00575Q6W349 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00575Q6W349 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC12.81□□□□□ -0.36
LINC00575Q6W349 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00575Q6W349 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
LINC00575Q6W349 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00575Q6W349 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00575Q6W349 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC00575Q6W349 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LINC00575Q6W349 Z82202.1-201ENST00000623446 1880 ntBASIC12.8□□□□□ -0.36
LINC00575Q6W349 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00575Q6W349 NEFHP1-201ENST00000412845 2629 ntBASIC12.8□□□□□ -0.36
LINC00575Q6W349 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00575Q6W349 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00575Q6W349 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00575Q6W349 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00575Q6W349 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LINC00575Q6W349 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00575Q6W349 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00575Q6W349 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00575Q6W349 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LINC00575Q6W349 AC020763.4-201ENST00000623414 4170 ntBASIC12.8□□□□□ -0.36
LINC00575Q6W349 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC00575Q6W349 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00575Q6W349 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00575Q6W349 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms