Protein–RNA interactions for Protein: Q6P1M0

SLC27A4, Long-chain fatty acid transport protein 4, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A4Q6P1M0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC27A4Q6P1M0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC27A4Q6P1M0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC27A4Q6P1M0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
SLC27A4Q6P1M0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 ZNRF2P3-201ENST00000424200 374 ntBASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC27A4Q6P1M0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC27A4Q6P1M0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 AC010141.2-201ENST00000452426 721 ntBASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 AC125437.2-201ENST00000625180 2167 ntBASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC27A4Q6P1M0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.36■□□□□ 0.53
SLC27A4Q6P1M0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms