Protein–RNA interactions for Protein: Q53H64

LINC00483, Putative uncharacterized protein encoded by LINC00483, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00483Q53H64 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC00483Q53H64 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC00483Q53H64 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 SPI1-203ENST00000533030 661 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00483Q53H64 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 CD37-204ENST00000535669 1674 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00483Q53H64 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 ME2-218ENST00000640965 2476 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 BMP1-204ENST00000397814 836 ntTSL 4 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 KRT18P5-201ENST00000436075 1291 ntBASIC12.12□□□□□ -0.47
LINC00483Q53H64 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 MFSD11-216ENST00000590393 1141 ntBASIC12.12□□□□□ -0.47
LINC00483Q53H64 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 BX119927.1-201ENST00000636596 1552 ntBASIC12.12□□□□□ -0.47
LINC00483Q53H64 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00483Q53H64 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00483Q53H64 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00483Q53H64 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
LINC00483Q53H64 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00483Q53H64 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LINC00483Q53H64 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00483Q53H64 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00483Q53H64 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00483Q53H64 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00483Q53H64 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms