Protein–RNA interactions for Protein: Q494R4

CCDC153, Coiled-coil domain-containing protein 153, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC153Q494R4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC153Q494R4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC153Q494R4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.03■□□□□ 0.8
CCDC153Q494R4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC153Q494R4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC153Q494R4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCDC153Q494R4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC153Q494R4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC153Q494R4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC153Q494R4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC153Q494R4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
CCDC153Q494R4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC153Q494R4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC153Q494R4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC153Q494R4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC153Q494R4 AC027612.3-201ENST00000413684 1047 ntBASIC20.02■□□□□ 0.8
CCDC153Q494R4 KRT18P20-201ENST00000548986 1279 ntBASIC20.02■□□□□ 0.8
CCDC153Q494R4 CCDC92B-201ENST00000575506 885 ntBASIC20.02■□□□□ 0.8
CCDC153Q494R4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC153Q494R4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC153Q494R4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC153Q494R4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC153Q494R4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC153Q494R4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.02■□□□□ 0.79
CCDC153Q494R4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC153Q494R4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC153Q494R4 DPP3P2-201ENST00000416030 1696 ntBASIC20.01■□□□□ 0.79
CCDC153Q494R4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC153Q494R4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC153Q494R4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC153Q494R4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC153Q494R4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.01■□□□□ 0.79
CCDC153Q494R4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC153Q494R4 AP001160.3-201ENST00000601484 763 ntBASIC20.01■□□□□ 0.79
CCDC153Q494R4 AC104187.1-201ENST00000607510 612 ntBASIC20.01■□□□□ 0.79
CCDC153Q494R4 AC243732.1-201ENST00000612648 864 ntBASIC20.01■□□□□ 0.79
CCDC153Q494R4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC153Q494R4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC153Q494R4 TMEM179-206ENST00000616017 1645 ntBASIC20.01■□□□□ 0.79
CCDC153Q494R4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC153Q494R4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC153Q494R4 H19-201ENST00000411754 1788 ntTSL 5 BASIC20■□□□□ 0.79
CCDC153Q494R4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC153Q494R4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC153Q494R4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CCDC153Q494R4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC153Q494R4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC153Q494R4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC153Q494R4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC153Q494R4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC153Q494R4 AC007322.3-201ENST00000426526 701 ntBASIC20■□□□□ 0.79
CCDC153Q494R4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC153Q494R4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20■□□□□ 0.79
CCDC153Q494R4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC153Q494R4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20■□□□□ 0.79
CCDC153Q494R4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CCDC153Q494R4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20■□□□□ 0.79
CCDC153Q494R4 AC116562.4-201ENST00000641316 2276 ntBASIC20■□□□□ 0.79
CCDC153Q494R4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC153Q494R4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20■□□□□ 0.79
CCDC153Q494R4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC153Q494R4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC153Q494R4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC153Q494R4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC153Q494R4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC153Q494R4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC153Q494R4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC153Q494R4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC153Q494R4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC153Q494R4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC153Q494R4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC153Q494R4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC153Q494R4 AC091799.1-201ENST00000422823 811 ntBASIC19.99■□□□□ 0.79
CCDC153Q494R4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC153Q494R4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC153Q494R4 FAM21FP-204ENST00000608637 956 ntBASIC19.99■□□□□ 0.79
CCDC153Q494R4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC153Q494R4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC153Q494R4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC153Q494R4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC153Q494R4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC153Q494R4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC153Q494R4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CCDC153Q494R4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC153Q494R4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC153Q494R4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC153Q494R4 LINC02228-203ENST00000641970 1355 ntBASIC19.98■□□□□ 0.79
CCDC153Q494R4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC153Q494R4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC153Q494R4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC153Q494R4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC153Q494R4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC153Q494R4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC153Q494R4 AL158211.5-201ENST00000623583 2518 ntBASIC19.98■□□□□ 0.79
CCDC153Q494R4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC153Q494R4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC153Q494R4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC153Q494R4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC153Q494R4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC153Q494R4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms