Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 VTC1YER072W 390 nt2.41□□□□□ -2.02
HRD3Q05787 YJL015CYJL015C 285 nt2.41□□□□□ -2.02
HRD3Q05787 GRX8YLR364W 330 nt2.41□□□□□ -2.02
HRD3Q05787 TRA1YHR099W 11235 nt2.41□□□□□ -2.02
HRD3Q05787 RPS27AYKL156W 249 nt2.4□□□□□ -2.03
HRD3Q05787 SGD1YLR336C 2700 nt2.4□□□□□ -2.03
HRD3Q05787 SOK2YMR016C 2358 nt2.39□□□□□ -2.03
HRD3Q05787 SNU114YKL173W 3027 nt2.39□□□□□ -2.03
HRD3Q05787 DOT6YER088C 2013 nt2.39□□□□□ -2.03
HRD3Q05787 SPG3YDR504C 384 nt2.39□□□□□ -2.03
HRD3Q05787 RPL36AYMR194W 303 nt2.39□□□□□ -2.03
HRD3Q05787 CRS5YOR031W 210 nt2.39□□□□□ -2.03
HRD3Q05787 SCD5YOR329C 2619 nt2.38□□□□□ -2.03
HRD3Q05787 FMP16YDR070C 282 nt2.38□□□□□ -2.03
HRD3Q05787 PHS1YJL097W 654 nt2.38□□□□□ -2.03
HRD3Q05787 SAK1YER129W 3429 nt2.38□□□□□ -2.03
HRD3Q05787 IRA2YOL081W 9240 nt2.37□□□□□ -2.03
HRD3Q05787 RBK1YCR036W 1002 nt2.37□□□□□ -2.03
HRD3Q05787 CYC7YEL039C 342 nt2.37□□□□□ -2.03
HRD3Q05787 YAL042C-AYAL042C-A 378 nt2.37□□□□□ -2.03
HRD3Q05787 YLR154W-EYLR154W-E 204 nt2.37□□□□□ -2.03
HRD3Q05787 HRD3YLR207W 2502 nt2.37□□□□□ -2.03
HRD3Q05787 SDC25YLL016W 3147 nt2.36□□□□□ -2.03
HRD3Q05787 SSN2YDR443C 4263 nt2.36□□□□□ -2.03
HRD3Q05787 DIS3YOL021C 3006 nt2.36□□□□□ -2.03
HRD3Q05787 YDR048CYDR048C 315 nt2.36□□□□□ -2.03
HRD3Q05787 HTB2YBL002W 396 nt2.36□□□□□ -2.03
HRD3Q05787 SNC2YOR327C 348 nt2.36□□□□□ -2.03
HRD3Q05787 BFA1YJR053W 1725 nt2.36□□□□□ -2.03
HRD3Q05787 NUP170YBL079W 4509 nt2.36□□□□□ -2.03
HRD3Q05787 YOP1YPR028W 543 nt2.35□□□□□ -2.03
HRD3Q05787 YPR099CYPR099C 357 nt2.35□□□□□ -2.03
HRD3Q05787 YDR239CYDR239C 2364 nt2.35□□□□□ -2.03
HRD3Q05787 TAE2YPL009C 3117 nt2.35□□□□□ -2.03
HRD3Q05787 VPS16YPL045W 2397 nt2.35□□□□□ -2.03
HRD3Q05787 STH1YIL126W 4080 nt2.34□□□□□ -2.03
HRD3Q05787 YGR069WYGR069W 336 nt2.34□□□□□ -2.03
HRD3Q05787 MRPL33YMR286W 261 nt2.34□□□□□ -2.03
HRD3Q05787 SAP190YKR028W 3102 nt2.33□□□□□ -2.04
HRD3Q05787 SVL3YPL032C 2478 nt2.33□□□□□ -2.04
HRD3Q05787 HTL1YCR020W-B 237 nt2.33□□□□□ -2.04
HRD3Q05787 YHL041WYHL041W 450 nt2.33□□□□□ -2.04
HRD3Q05787 JLP2YMR132C 627 nt2.33□□□□□ -2.04
HRD3Q05787 MF(ALPHA)1YPL187W 498 nt2.33□□□□□ -2.04
HRD3Q05787 TOP2YNL088W 4287 nt2.33□□□□□ -2.04
HRD3Q05787 DBP6YNR038W 1890 nt2.33□□□□□ -2.04
HRD3Q05787 SUL1YBR294W 2580 nt2.32□□□□□ -2.04
HRD3Q05787 ACB1YGR037C 264 nt2.32□□□□□ -2.04
HRD3Q05787 YGR265WYGR265W 411 nt2.32□□□□□ -2.04
HRD3Q05787 YIL059CYIL059C 366 nt2.32□□□□□ -2.04
HRD3Q05787 ATP7YKL016C 525 nt2.32□□□□□ -2.04
HRD3Q05787 SAR1YPL218W 573 nt2.32□□□□□ -2.04
HRD3Q05787 ACM1YPL267W 630 nt2.32□□□□□ -2.04
HRD3Q05787 YBR277CYBR277C 402 nt2.32□□□□□ -2.04
HRD3Q05787 VPS35YJL154C 2835 nt2.32□□□□□ -2.04
HRD3Q05787 OSH6YKR003W 1347 nt2.32□□□□□ -2.04
HRD3Q05787 YKU80YMR106C 1890 nt2.32□□□□□ -2.04
HRD3Q05787 GEA1YJR031C 4227 nt2.32□□□□□ -2.04
HRD3Q05787 HOS4YIL112W 3252 nt2.31□□□□□ -2.04
HRD3Q05787 ISW1YBR245C 3390 nt2.31□□□□□ -2.04
HRD3Q05787 PSD2YGR170W 3417 nt2.31□□□□□ -2.04
HRD3Q05787 PAN3YKL025C 2040 nt2.31□□□□□ -2.04
HRD3Q05787 YDR344CYDR344C 444 nt2.31□□□□□ -2.04
HRD3Q05787 YGL069CYGL069C 465 nt2.31□□□□□ -2.04
HRD3Q05787 YGL188C-AYGL188C-A 141 nt2.31□□□□□ -2.04
HRD3Q05787 NOP10YHR072W-A 177 nt2.31□□□□□ -2.04
HRD3Q05787 YKL183C-AYKL183C-A 213 nt2.31□□□□□ -2.04
HRD3Q05787 KAP123YER110C 3342 nt2.31□□□□□ -2.04
HRD3Q05787 SNF5YBR289W 2718 nt2.31□□□□□ -2.04
HRD3Q05787 CLN3YAL040C 1743 nt2.31□□□□□ -2.04
HRD3Q05787 DFG16YOR030W 1860 nt2.31□□□□□ -2.04
HRD3Q05787 TOF2YKR010C 2316 nt2.3□□□□□ -2.04
HRD3Q05787 VPS13YLL040C 9435 nt2.3□□□□□ -2.04
HRD3Q05787 YEF3YLR249W 3135 nt2.3□□□□□ -2.04
HRD3Q05787 YDL211CYDL211C 1119 nt2.3□□□□□ -2.04
HRD3Q05787 tM(CAU)Q1tM(CAU)Q1 76 nt2.3□□□□□ -2.04
HRD3Q05787 SMD1YGR074W 441 nt2.3□□□□□ -2.04
HRD3Q05787 KTI11YBL071W-A 249 nt2.3□□□□□ -2.04
HRD3Q05787 VMA9YCL005W-A 222 nt2.3□□□□□ -2.04
HRD3Q05787 LYS9YNR050C 1341 nt2.3□□□□□ -2.04
HRD3Q05787 ALK2YBL009W 2031 nt2.3□□□□□ -2.04
HRD3Q05787 RRP6YOR001W 2202 nt2.3□□□□□ -2.04
HRD3Q05787 SMY2YBR172C 2223 nt2.29□□□□□ -2.04
HRD3Q05787 snR80snR80 171 nt2.29□□□□□ -2.04
HRD3Q05787 INP53YOR109W 3324 nt2.29□□□□□ -2.04
HRD3Q05787 AMS1YGL156W 3252 nt2.29□□□□□ -2.04
HRD3Q05787 RGA2YDR379W 3030 nt2.28□□□□□ -2.04
HRD3Q05787 YIL080WYIL080W 4722 nt2.28□□□□□ -2.04
HRD3Q05787 HYP2YEL034W 474 nt2.28□□□□□ -2.04
HRD3Q05787 YGR050CYGR050C 357 nt2.28□□□□□ -2.04
HRD3Q05787 YIL102CYIL102C 306 nt2.28□□□□□ -2.04
HRD3Q05787 YNL337WYNL337W 255 nt2.28□□□□□ -2.04
HRD3Q05787 RIC1YLR039C 3171 nt2.28□□□□□ -2.04
HRD3Q05787 GUP1YGL084C 1683 nt2.28□□□□□ -2.05
HRD3Q05787 AFI1YOR129C 2682 nt2.27□□□□□ -2.05
HRD3Q05787 SMY1YKL079W 1971 nt2.27□□□□□ -2.05
HRD3Q05787 ORC2YBR060C 1863 nt2.27□□□□□ -2.05
HRD3Q05787 TFC3YAL001C 3483 nt2.27□□□□□ -2.05
HRD3Q05787 YCR018C-AYCR018C-A 255 nt2.27□□□□□ -2.05
HRD3Q05787 YER079C-AYER079C-A 339 nt2.27□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 252.9 ms