Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX4P78413 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX4P78413 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.97■□□□□ 0.95
IRX4P78413 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.97■□□□□ 0.95
IRX4P78413 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX4P78413 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX4P78413 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX4P78413 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX4P78413 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX4P78413 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX4P78413 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX4P78413 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX4P78413 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.97■□□□□ 0.95
IRX4P78413 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.97■□□□□ 0.95
IRX4P78413 AC091874.3-201ENST00000512672 1195 ntBASIC20.97■□□□□ 0.95
IRX4P78413 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
IRX4P78413 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.97■□□□□ 0.95
IRX4P78413 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.97■□□□□ 0.95
IRX4P78413 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX4P78413 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX4P78413 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IRX4P78413 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
IRX4P78413 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.97■□□□□ 0.95
IRX4P78413 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
IRX4P78413 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IRX4P78413 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
IRX4P78413 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IRX4P78413 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
IRX4P78413 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
IRX4P78413 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.96■□□□□ 0.95
IRX4P78413 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IRX4P78413 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.96■□□□□ 0.95
IRX4P78413 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IRX4P78413 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.96■□□□□ 0.95
IRX4P78413 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.96■□□□□ 0.95
IRX4P78413 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
IRX4P78413 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
IRX4P78413 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.95■□□□□ 0.94
IRX4P78413 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
IRX4P78413 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.95■□□□□ 0.94
IRX4P78413 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.95■□□□□ 0.94
IRX4P78413 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.95■□□□□ 0.94
IRX4P78413 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.95■□□□□ 0.94
IRX4P78413 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.95■□□□□ 0.94
IRX4P78413 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.95■□□□□ 0.94
IRX4P78413 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.95■□□□□ 0.94
IRX4P78413 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IRX4P78413 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
IRX4P78413 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
IRX4P78413 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
IRX4P78413 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.94■□□□□ 0.94
IRX4P78413 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.94■□□□□ 0.94
IRX4P78413 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
IRX4P78413 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.94■□□□□ 0.94
IRX4P78413 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.94■□□□□ 0.94
IRX4P78413 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 AL034346.1-201ENST00000568244 1277 ntBASIC20.94■□□□□ 0.94
IRX4P78413 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.94■□□□□ 0.94
IRX4P78413 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 FEM1AP1-201ENST00000431297 1995 ntBASIC20.94■□□□□ 0.94
IRX4P78413 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IRX4P78413 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
IRX4P78413 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IRX4P78413 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.93■□□□□ 0.94
IRX4P78413 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.93■□□□□ 0.94
IRX4P78413 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IRX4P78413 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IRX4P78413 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IRX4P78413 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.93■□□□□ 0.94
IRX4P78413 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.93■□□□□ 0.94
IRX4P78413 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IRX4P78413 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.93■□□□□ 0.94
IRX4P78413 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.93■□□□□ 0.94
IRX4P78413 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms