Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN6P56747 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLDN6P56747 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN6P56747 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN6P56747 ARMC10P1-201ENST00000313754 855 ntBASIC19.53■□□□□ 0.72
CLDN6P56747 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CLDN6P56747 AL390719.1-204ENST00000412397 1219 ntBASIC19.53■□□□□ 0.72
CLDN6P56747 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CLDN6P56747 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.53■□□□□ 0.72
CLDN6P56747 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.53■□□□□ 0.72
CLDN6P56747 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN6P56747 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN6P56747 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN6P56747 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN6P56747 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN6P56747 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CLDN6P56747 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.53■□□□□ 0.72
CLDN6P56747 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN6P56747 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CLDN6P56747 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN6P56747 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN6P56747 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLDN6P56747 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.52■□□□□ 0.72
CLDN6P56747 CD177P1-201ENST00000606252 935 ntBASIC19.52■□□□□ 0.72
CLDN6P56747 AL356652.1-201ENST00000615962 565 ntBASIC19.52■□□□□ 0.72
CLDN6P56747 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.52■□□□□ 0.72
CLDN6P56747 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN6P56747 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN6P56747 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.52■□□□□ 0.71
CLDN6P56747 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLDN6P56747 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.52■□□□□ 0.71
CLDN6P56747 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLDN6P56747 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLDN6P56747 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN6P56747 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN6P56747 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLDN6P56747 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN6P56747 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
CLDN6P56747 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDN6P56747 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.51■□□□□ 0.71
CLDN6P56747 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDN6P56747 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLDN6P56747 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDN6P56747 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN6P56747 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN6P56747 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN6P56747 KRT8P9-201ENST00000558927 1449 ntBASIC19.51■□□□□ 0.71
CLDN6P56747 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLDN6P56747 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN6P56747 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN6P56747 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN6P56747 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN6P56747 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLDN6P56747 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN6P56747 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN6P56747 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN6P56747 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN6P56747 FAM197Y1-201ENST00000421178 764 ntBASIC19.5■□□□□ 0.71
CLDN6P56747 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN6P56747 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN6P56747 MIR6786-201ENST00000616843 113 ntBASIC19.5■□□□□ 0.71
CLDN6P56747 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN6P56747 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN6P56747 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN6P56747 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN6P56747 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN6P56747 HTR7P1-201ENST00000538670 1336 ntBASIC19.5■□□□□ 0.71
CLDN6P56747 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN6P56747 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN6P56747 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN6P56747 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN6P56747 MMP23A-201ENST00000234610 1017 ntBASIC19.49■□□□□ 0.71
CLDN6P56747 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.49■□□□□ 0.71
CLDN6P56747 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN6P56747 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
CLDN6P56747 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.49■□□□□ 0.71
CLDN6P56747 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN6P56747 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN6P56747 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms