Protein–RNA interactions for Protein: P53905

LSM7, U6 snRNA-associated Sm-like protein LSm7, yeastyeast

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM7P53905 YJR140W-AYJR140W-A 150 nt0.99□□□□□ -2.25
LSM7P53905 FCF2YLR051C 654 nt0.99□□□□□ -2.25
LSM7P53905 CTK3YML112W 891 nt0.99□□□□□ -2.25
LSM7P53905 YBR287WYBR287W 1284 nt0.99□□□□□ -2.25
LSM7P53905 NUP192YJL039C 5052 nt0.99□□□□□ -2.25
LSM7P53905 NUP188YML103C 4968 nt0.99□□□□□ -2.25
LSM7P53905 YFL002W-BYFL002W-B 1317 nt0.98□□□□□ -2.25
LSM7P53905 YGR161W-AYGR161W-A 1317 nt0.98□□□□□ -2.25
LSM7P53905 YBL100W-AYBL100W-A 1317 nt0.98□□□□□ -2.25
LSM7P53905 SPT7YBR081C 3999 nt0.98□□□□□ -2.25
LSM7P53905 YCL020WYCL020W 1317 nt0.98□□□□□ -2.25
LSM7P53905 YHR054CYHR054C 1065 nt0.98□□□□□ -2.25
LSM7P53905 RPL42BYHR141C 321 nt0.98□□□□□ -2.25
LSM7P53905 RCN1YKL159C 636 nt0.98□□□□□ -2.25
LSM7P53905 RPL40BYKR094C 387 nt0.98□□□□□ -2.25
LSM7P53905 NOP15YNL110C 663 nt0.98□□□□□ -2.25
LSM7P53905 YNL146C-AYNL146C-A 195 nt0.98□□□□□ -2.25
LSM7P53905 YBL073WYBL073W 312 nt0.98□□□□□ -2.25
LSM7P53905 RPL42AYNL162W 321 nt0.98□□□□□ -2.25
LSM7P53905 YBL108WYBL108W 306 nt0.98□□□□□ -2.25
LSM7P53905 YPR146CYPR146C 330 nt0.98□□□□□ -2.25
LSM7P53905 MUK1YPL070W 1839 nt0.97□□□□□ -2.25
LSM7P53905 CHZ1YER030W 462 nt0.97□□□□□ -2.25
LSM7P53905 YGR228WYGR228W 345 nt0.97□□□□□ -2.25
LSM7P53905 YHL009W-AYHL009W-A 1242 nt0.97□□□□□ -2.25
LSM7P53905 TIM10YHR005C-A 282 nt0.97□□□□□ -2.25
LSM7P53905 tT(UGU)Q1tT(UGU)Q1 76 nt0.97□□□□□ -2.25
LSM7P53905 TIM18YOR297C 579 nt0.97□□□□□ -2.25
LSM7P53905 YPL197CYPL197C 414 nt0.97□□□□□ -2.25
LSM7P53905 YPR147CYPR147C 915 nt0.97□□□□□ -2.25
LSM7P53905 YCL046WYCL046W 324 nt0.97□□□□□ -2.25
LSM7P53905 RAD50YNL250W 3939 nt0.97□□□□□ -2.25
LSM7P53905 SEF1YBL066C 3447 nt0.96□□□□□ -2.26
LSM7P53905 MSH3YCR092C 3057 nt0.96□□□□□ -2.26
LSM7P53905 snR79snR79 84 nt0.96□□□□□ -2.26
LSM7P53905 LRP1YHR081W 555 nt0.96□□□□□ -2.26
LSM7P53905 SEC28YIL076W 891 nt0.96□□□□□ -2.26
LSM7P53905 BMT5YIL096C 1011 nt0.96□□□□□ -2.26
LSM7P53905 SPC1YJR010C-A 285 nt0.96□□□□□ -2.26
LSM7P53905 PKR1YMR123W 369 nt0.96□□□□□ -2.26
LSM7P53905 COX7YMR256C 183 nt0.96□□□□□ -2.26
LSM7P53905 SAC3YDR159W 3906 nt0.96□□□□□ -2.26
LSM7P53905 APL1YJR005W 2103 nt0.95□□□□□ -2.26
LSM7P53905 SPR3YGR059W 1539 nt0.95□□□□□ -2.26
LSM7P53905 YGL217CYGL217C 342 nt0.95□□□□□ -2.26
LSM7P53905 YPR096CYPR096C 303 nt0.95□□□□□ -2.26
LSM7P53905 BEM2YER155C 6504 nt0.95□□□□□ -2.26
LSM7P53905 SLX4YLR135W 2247 nt0.95□□□□□ -2.26
LSM7P53905 YDR220CYDR220C 294 nt0.94□□□□□ -2.26
LSM7P53905 SMB1YER029C 591 nt0.94□□□□□ -2.26
LSM7P53905 YGL015CYGL015C 393 nt0.94□□□□□ -2.26
LSM7P53905 YKL111CYKL111C 336 nt0.94□□□□□ -2.26
LSM7P53905 YLL020CYLL020C 306 nt0.94□□□□□ -2.26
LSM7P53905 IPP1YBR011C 864 nt0.94□□□□□ -2.26
LSM7P53905 SPO75YLL005C 2607 nt0.94□□□□□ -2.26
LSM7P53905 YEL018C-AYEL018C-A 534 nt0.93□□□□□ -2.26
LSM7P53905 MND1YGL183C 660 nt0.93□□□□□ -2.26
LSM7P53905 PAU18YLL064C 363 nt0.93□□□□□ -2.26
LSM7P53905 DDR48YMR173W 1293 nt0.93□□□□□ -2.26
LSM7P53905 PAU6YNR076W 363 nt0.93□□□□□ -2.26
LSM7P53905 YOR161W-BYOR161W-B 261 nt0.93□□□□□ -2.26
LSM7P53905 IRR1YIL026C 3453 nt0.93□□□□□ -2.26
LSM7P53905 UTP13YLR222C 2454 nt0.93□□□□□ -2.26
LSM7P53905 SGO1YOR073W 1773 nt0.93□□□□□ -2.26
LSM7P53905 SCC2YDR180W 4482 nt0.92□□□□□ -2.26
LSM7P53905 snR9snR9 187 nt0.92□□□□□ -2.26
LSM7P53905 DCP2YNL118C 2913 nt0.92□□□□□ -2.26
LSM7P53905 YLL054CYLL054C 2532 nt0.92□□□□□ -2.26
LSM7P53905 ZRG17YNR039C 1818 nt0.92□□□□□ -2.26
LSM7P53905 YOR192C-AYOR192C-A 1317 nt0.91□□□□□ -2.26
LSM7P53905 YLR198CYLR198C 360 nt0.91□□□□□ -2.26
LSM7P53905 YLR271WYLR271W 825 nt0.91□□□□□ -2.26
LSM7P53905 YMR254CYMR254C 309 nt0.91□□□□□ -2.26
LSM7P53905 RPL9BYNL067W 576 nt0.91□□□□□ -2.26
LSM7P53905 YBR063CYBR063C 1215 nt0.91□□□□□ -2.26
LSM7P53905 SEC3YER008C 4011 nt0.91□□□□□ -2.26
LSM7P53905 VPS54YDR027C 2670 nt0.91□□□□□ -2.26
LSM7P53905 PAU2YEL049W 363 nt0.9□□□□□ -2.27
LSM7P53905 YER121WYER121W 345 nt0.9□□□□□ -2.27
LSM7P53905 RPC10YHR143W-A 213 nt0.9□□□□□ -2.27
LSM7P53905 YIR018C-AYIR018C-A 138 nt0.9□□□□□ -2.27
LSM7P53905 DOP1YDR141C 5097 nt0.9□□□□□ -2.27
LSM7P53905 HDA3YPR179C 1968 nt0.9□□□□□ -2.27
LSM7P53905 YJR029WYJR029W 5268 nt0.9□□□□□ -2.27
LSM7P53905 YPR137C-BYPR137C-B 5268 nt0.9□□□□□ -2.27
LSM7P53905 SIP4YJL089W 2490 nt0.9□□□□□ -2.27
LSM7P53905 GDS1YOR355W 1569 nt0.89□□□□□ -2.27
LSM7P53905 YNL114CYNL114C 372 nt0.89□□□□□ -2.27
LSM7P53905 CSM4YPL200W 471 nt0.89□□□□□ -2.27
LSM7P53905 SWI4YER111C 3282 nt0.88□□□□□ -2.27
LSM7P53905 KIP1YBL063W 3336 nt0.88□□□□□ -2.27
LSM7P53905 snR83snR83 306 nt0.88□□□□□ -2.27
LSM7P53905 RTR1YER139C 681 nt0.88□□□□□ -2.27
LSM7P53905 ECM9YKR004C 1134 nt0.88□□□□□ -2.27
LSM7P53905 DCP1YOL149W 696 nt0.88□□□□□ -2.27
LSM7P53905 YDL152WYDL152W 366 nt0.87□□□□□ -2.27
LSM7P53905 SNO3YFL060C 669 nt0.87□□□□□ -2.27
LSM7P53905 YHR028W-AYHR028W-A 321 nt0.87□□□□□ -2.27
LSM7P53905 YIR020CYIR020C 303 nt0.87□□□□□ -2.27
LSM7P53905 NBP1YLR457C 960 nt0.87□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms